RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 MFSD11O43934 449 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 GHRP10912 638 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 PTPN9P43378 593 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 AP1B1Q10567 949 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 NCBP2-AS2Q69YL0 99 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 HEATR6Q6AI08 1181 aaKnown RBP16.31■□□□□ 0.2
LRFN1-201ENST00000248668 SIX6OS1Q8N1H7 587 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 STK32AQ8WU08 396 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 DDX43Q9NXZ2 648 aaKnown RBP16.31■□□□□ 0.2
LRFN1-201ENST00000248668 SENP1Q9P0U3 644 aa16.31■□□□□ 0.2
LRFN1-201ENST00000248668 HAS3O00219 553 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 LPXNO60711 386 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 VAV1P15498 845 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 ARL4AP40617 200 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 PURAQ00577 322 aaKnown RBP16.3■□□□□ 0.2
LRFN1-201ENST00000248668 OLIG2Q13516 323 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 PDK4Q16654 411 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 WLSQ5T9L3 541 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 PAQR9Q6ZVX9 377 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 MZB1Q8WU39 189 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 ZNF75CPQ92670 426 aaPredicted RBP16.3■□□□□ 0.2
LRFN1-201ENST00000248668 SLC13A1Q9BZW2 595 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 MIOSQ9NXC5 875 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 GDAP2Q9NXN4 497 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 ST3GAL5Q9UNP4 418 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.3■□□□□ 0.2
LRFN1-201ENST00000248668 TRIM49D1C9J1S8 452 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 NRP1O14786 923 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 EZRP15311 586 aaKnown RBP16.3■□□□□ 0.2
LRFN1-201ENST00000248668 AXLP30530 894 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 CLCNKBP51801 687 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 TKTL1P51854 596 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 NCALDP61601 193 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 SLC45A4Q5BKX6 768 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 ANKLE1Q8NAG6 615 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 PTPRN2Q92932 1015 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 ERP27Q96DN0 273 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 SENP8Q96LD8 212 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 POPDC2Q9HBU9 364 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 SMYD2Q9NRG4 433 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 IL1RAPL1Q9NZN1 696 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 BAIAP2L1Q9UHR4 511 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 BCLAF3A2AJT9 711 aaKnown RBP16.3■□□□□ 0.2
LRFN1-201ENST00000248668 KCNE1P15382 129 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 MATKP42679 507 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 CACNA2D1P54289 1103 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 FKBP1BP68106 108 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 CLEC20AQ6ZU45 233 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 GPRIN1Q7Z2K8 1008 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 ZDHHC17Q8IUH5 632 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 CDKL3Q8IVW4 592 aaPredicted RBP16.3■□□□□ 0.2
LRFN1-201ENST00000248668 SLC7A14Q8TBB6 771 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 C11orf84Q9BUA3 381 aaPredicted RBP16.3■□□□□ 0.2
LRFN1-201ENST00000248668 TSPYL2Q9H2G4 693 aaPredicted RBP16.3■□□□□ 0.2
LRFN1-201ENST00000248668 TMEM30AQ9NV96 361 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 PRKAG3Q9UGI9 489 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 TTLL3Q9Y4R7 772 aa16.3■□□□□ 0.2
LRFN1-201ENST00000248668 MYBPHLA2RUH7 354 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 CAPN9O14815 690 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 NPR3P17342 541 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 PNPLA4P41247 253 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 SCNN1GP51170 649 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 SLC8A3P57103 927 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 SESN2P58004 480 aaPredicted RBP16.29■□□□□ 0.2
LRFN1-201ENST00000248668 CRYMQ14894 314 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 OTOAQ7RTW8 1153 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 C3orf58Q8NDZ4 430 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 DHRS4Q9BTZ2 278 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 DUSP16Q9BY84 665 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 ULBP1Q9BZM6 244 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 PLAC1Q9HBJ0 212 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 TOP3BO95985 862 aaKnown RBP16.29■□□□□ 0.2
LRFN1-201ENST00000248668 AMHP03971 560 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 IFRD2Q12894 506 aaPredicted RBP16.29■□□□□ 0.2
LRFN1-201ENST00000248668 NBPF20Q3BBV1 942 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 BANPQ8N9N5 519 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 SLC44A1Q8WWI5 657 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 EDEM1Q92611 657 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 CENPIQ92674 756 aaPredicted RBP16.29■□□□□ 0.2
LRFN1-201ENST00000248668 KLHL29Q96CT2 875 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 NMRK2Q9NPI5 230 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 CRTAC1Q9NQ79 661 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 ARHGEF4Q9NR80 690 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 SNX10Q9Y5X0 201 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 SCN4AP35499 1836 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 XPO1O14980 1071 aaKnown RBP16.29■□□□□ 0.2
LRFN1-201ENST00000248668 DNAJC8O75937 253 aaPredicted RBP16.29■□□□□ 0.2
LRFN1-201ENST00000248668 F7P08709 466 aaPredicted RBP16.29■□□□□ 0.2
LRFN1-201ENST00000248668 UNC5AQ6ZN44 842 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 LRRC6Q86X45 466 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 PDCD7Q8N8D1 485 aaKnown RBP16.29■□□□□ 0.2
LRFN1-201ENST00000248668 DEPDC1BQ8WUY9 529 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 MYLK2Q9H1R3 596 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 PIGVQ9NUD9 493 aa16.29■□□□□ 0.2
LRFN1-201ENST00000248668 G3BP2Q9UN86 482 aaKnown RBP16.29■□□□□ 0.2
LRFN1-201ENST00000248668 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.28■□□□□ 0.2
LRFN1-201ENST00000248668 IQANK1A0A1B0GTG1 560 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 FAM72CH0Y354 149 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 KCNK1O00180 336 aa16.28■□□□□ 0.2
LRFN1-201ENST00000248668 USP17L7P0C7H9 530 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms