RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 GRAP2O75791 330 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 EGFP01133 1207 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 UBASH3AP57075 661 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 GOLGA8FQ08AF8 430 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 GOLGA8DPQ0D2H9 430 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 NR1H3Q13133 447 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 TRIP4Q15650 581 aaPredicted RBP22.75■■□□□ 1.23
SCN1B-206ENST00000638536 OLFML1Q6UWY5 402 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 TPGS1Q6ZTW0 290 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 CACNA2D4Q7Z3S7 1137 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 DENND1CQ8IV53 801 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 SFTPA1Q8IWL2 248 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 TMEM35BQ8NCS4 154 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 RNF214Q8ND24 703 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 OTUB2Q96DC9 234 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 P2RY13Q9BPV8 354 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 TTYH3Q9C0H2 523 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 C2orf42Q9NWW7 574 aa22.75■■□□□ 1.23
SCN1B-206ENST00000638536 WDR87Q6ZQQ6 2873 aa22.74■■□□□ 1.23
SCN1B-206ENST00000638536 H0Y858 1186 aa22.74■■□□□ 1.23
SCN1B-206ENST00000638536 ADH5P11766 374 aa22.74■■□□□ 1.23
SCN1B-206ENST00000638536 PBX1P40424 430 aa22.74■■□□□ 1.23
SCN1B-206ENST00000638536 RPS9P46781 194 aaKnown RBP22.74■■□□□ 1.23
SCN1B-206ENST00000638536 TPM4P67936 248 aa22.74■■□□□ 1.23
SCN1B-206ENST00000638536 NOMO3P69849 1222 aa22.74■■□□□ 1.23
SCN1B-206ENST00000638536 CDR2Q01850 454 aa22.74■■□□□ 1.23
SCN1B-206ENST00000638536 MTAPQ13126 283 aa22.74■■□□□ 1.23
SCN1B-206ENST00000638536 E4F1Q66K89 784 aaPredicted RBP22.74■■□□□ 1.23
SCN1B-206ENST00000638536 OR6B2Q6IFH4 312 aa22.74■■□□□ 1.23
SCN1B-206ENST00000638536 C1orf228Q6PIY5 440 aa22.74■■□□□ 1.23
SCN1B-206ENST00000638536 MAML2Q8IZL2 1156 aaPredicted RBP22.74■■□□□ 1.23
SCN1B-206ENST00000638536 NAT16Q8N8M0 369 aa22.74■■□□□ 1.23
SCN1B-206ENST00000638536 DQX1Q8TE96 717 aaKnown RBP22.74■■□□□ 1.23
SCN1B-206ENST00000638536 TRIM24O15164 1050 aa22.73■■□□□ 1.23
SCN1B-206ENST00000638536 CYP1A1P04798 512 aaPredicted RBP22.73■■□□□ 1.23
SCN1B-206ENST00000638536 YWHAZP63104 245 aaKnown RBP22.73■■□□□ 1.23
SCN1B-206ENST00000638536 NAA35Q5VZE5 725 aa22.73■■□□□ 1.23
SCN1B-206ENST00000638536 PKN3Q6P5Z2 889 aa22.73■■□□□ 1.23
SCN1B-206ENST00000638536 IRF2BP2Q7Z5L9 587 aa22.73■■□□□ 1.23
SCN1B-206ENST00000638536 GOLGA1Q92805 767 aa22.73■■□□□ 1.23
SCN1B-206ENST00000638536 CD101Q93033 1021 aa22.73■■□□□ 1.23
SCN1B-206ENST00000638536 BHMTQ93088 406 aa22.73■■□□□ 1.23
SCN1B-206ENST00000638536 CHRDQ9H2X0 955 aa22.73■■□□□ 1.23
SCN1B-206ENST00000638536 IFNKQ9P0W0 207 aa22.73■■□□□ 1.23
SCN1B-206ENST00000638536 CEP83Q9Y592 693 aa22.73■■□□□ 1.23
SCN1B-206ENST00000638536 NCAM2O15394 837 aa22.72■■□□□ 1.23
SCN1B-206ENST00000638536 HOXC13P31276 330 aa22.72■■□□□ 1.23
SCN1B-206ENST00000638536 ANO4Q32M45 955 aa22.72■■□□□ 1.23
SCN1B-206ENST00000638536 TAC4Q86UU9 113 aa22.72■■□□□ 1.23
SCN1B-206ENST00000638536 ZNF677Q86XU0 584 aa22.72■■□□□ 1.23
SCN1B-206ENST00000638536 C1orf210Q8IVY1 113 aa22.72■■□□□ 1.23
SCN1B-206ENST00000638536 OLIG1Q8TAK6 271 aa22.72■■□□□ 1.23
SCN1B-206ENST00000638536 NOX5Q96PH1 765 aa22.72■■□□□ 1.23
SCN1B-206ENST00000638536 POPDC2Q9HBU9 364 aa22.72■■□□□ 1.23
SCN1B-206ENST00000638536 HBS1LQ9Y450 684 aaKnown RBP22.72■■□□□ 1.23
SCN1B-206ENST00000638536 LRRC53A6NM62 1247 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 SART1O43290 800 aaKnown RBP22.71■■□□□ 1.23
SCN1B-206ENST00000638536 ADH1CP00326 375 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 IGLV3-27P01718 113 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 GABRB2P47870 512 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 AMPD2Q01433 879 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 ANGPT1Q15389 498 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 ERICH1Q86X53 443 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 ETFBKMTQ8IXQ9 262 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 DEFB106AQ8N104 65 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 SLC30A5Q8TAD4 765 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 PLD4Q96BZ4 506 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 SYNCQ9H7C4 482 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 POLR3BQ9NW08 1133 aaPredicted RBP22.71■■□□□ 1.23
SCN1B-206ENST00000638536 SPATA6Q9NWH7 488 aaPredicted RBP22.71■■□□□ 1.23
SCN1B-206ENST00000638536 PLK2Q9NYY3 685 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 LSM8O95777 96 aaKnown RBP22.71■■□□□ 1.23
SCN1B-206ENST00000638536 NUBP1P53384 320 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 SLC6A3Q01959 620 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 GAD2Q05329 585 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 GRSF1Q12849 480 aaKnown RBP eCLIP22.71■■□□□ 1.23
SCN1B-206ENST00000638536 XYLT1Q86Y38 959 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 SLC2A13Q96QE2 648 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 ADAM33Q9BZ11 813 aa22.71■■□□□ 1.23
SCN1B-206ENST00000638536 NEDD8-MDP1E9PL57 170 aa22.7■■□□□ 1.22
SCN1B-206ENST00000638536 CAPN9O14815 690 aa22.7■■□□□ 1.22
SCN1B-206ENST00000638536 HOXC11O43248 304 aaPredicted RBP22.7■■□□□ 1.22
SCN1B-206ENST00000638536 ZNF445P59923 1031 aa22.7■■□□□ 1.22
SCN1B-206ENST00000638536 DCAF6Q58WW2 860 aa22.7■■□□□ 1.22
SCN1B-206ENST00000638536 BEND5Q7L4P6 421 aa22.7■■□□□ 1.22
SCN1B-206ENST00000638536 PHLDB2Q86SQ0 1253 aa22.7■■□□□ 1.22
SCN1B-206ENST00000638536 PHTF2Q8N3S3 785 aa22.7■■□□□ 1.22
SCN1B-206ENST00000638536 IPO4Q8TEX9 1081 aaKnown RBP22.7■■□□□ 1.22
SCN1B-206ENST00000638536 C18orf8Q96DM3 657 aa22.7■■□□□ 1.22
SCN1B-206ENST00000638536 FCRL2Q96LA5 508 aaPredicted RBP22.7■■□□□ 1.22
SCN1B-206ENST00000638536 BBS2Q9BXC9 721 aa22.7■■□□□ 1.22
SCN1B-206ENST00000638536 DCLK3Q9C098 648 aa22.7■■□□□ 1.22
SCN1B-206ENST00000638536 XPO4Q9C0E2 1151 aaKnown RBP22.7■■□□□ 1.22
SCN1B-206ENST00000638536 KCNH6Q9H252 994 aa22.7■■□□□ 1.22
SCN1B-206ENST00000638536 CALCOCO1Q9P1Z2 691 aa22.7■■□□□ 1.22
SCN1B-206ENST00000638536 K7EQS6 105 aa22.69■■□□□ 1.22
SCN1B-206ENST00000638536 IGLV3-25P01717 112 aa22.69■■□□□ 1.22
SCN1B-206ENST00000638536 UNGP13051 313 aaPredicted RBP22.69■■□□□ 1.22
SCN1B-206ENST00000638536 TYRP14679 529 aa22.69■■□□□ 1.22
SCN1B-206ENST00000638536 TBX4P57082 545 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms