RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SSTR3P32745 418 aaPredicted RBP11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 CPA2P48052 419 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 TMPRSS15P98073 1019 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 TFAMQ00059 246 aaKnown RBP11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 PLCB3Q01970 1234 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 ZNF252P-AS1Q0IIN9 211 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 BST1Q10588 318 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 VGLL4Q14135 290 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 MMEL1Q495T6 779 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 MSS51Q4VC12 460 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 CELF3Q5SZQ8 465 aaKnown RBP11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 ATF7IP2Q5U623 682 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 ARID3BQ8IVW6 561 aaPredicted RBP11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 CCDC33Q8N5R6 958 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 ICA1LQ8NDH6 482 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 CATSPER1Q8NEC5 780 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 ACTRT2Q8TDY3 377 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 DDI1Q8WTU0 396 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 RSAD2Q8WXG1 361 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 MPP4Q96JB8 637 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 MRPS26Q9BYN8 205 aaKnown RBP11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 PREBQ9HCU5 417 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 PTPRHQ9HD43 1115 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 HBS1LQ9Y450 684 aaKnown RBP11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 TEX264Q9Y6I9 313 aa11.07□□□□□ -0.64
MTHFD1-210ENST00000555252 TCRBV9S1A1TA0A576 114 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 DCAF8L1A6NGE4 600 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 E5RJQ4 531 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 F8VP50 259 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 PI4K2BG5E9Z4 385 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 WEE2P0C1S8 567 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 PRDX6P30041 224 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 RPL22P35268 128 aaKnown RBP11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 ASPAP45381 313 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 HPCAP84074 193 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 CREB5Q02930 508 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 TNFAIP2Q03169 654 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 KDSRQ06136 332 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 POU5F1BQ06416 359 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 FAAP100Q0VG06 881 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 MSLNQ13421 630 aaPredicted RBP11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 CYLC2Q14093 348 aaPredicted RBP11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 ACAP1Q15027 740 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 KYAT1Q16773 422 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 USP41Q3LFD5 358 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 BBS9Q3SYG4 887 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 HSF5Q4G112 596 aaPredicted RBP11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 SFT2D3Q587I9 215 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 ACBD5Q5T8D3 534 aaPredicted RBP11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 ANKRD22Q5VYY1 191 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 WDR75Q8IWA0 830 aaKnown RBP11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 WDTC1Q8N5D0 677 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 ACAP3Q96P50 834 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 KLF6Q99612 283 aaPredicted RBP11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 NFKBIZQ9BYH8 718 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 XYLT2Q9H1B5 865 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 SMARCAD1Q9H4L7 1026 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 FAM124BQ9H5Z6 455 aaPredicted RBP11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 OCEL1Q9H607 264 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 THAP1Q9NVV9 213 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 C6orf203Q9P0P8 240 aaPredicted RBP11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 XPO7Q9UIA9 1087 aaKnown RBP11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 RAB26Q9ULW5 256 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 DMTF1Q9Y222 760 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 TNFSF13BQ9Y275 285 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 MAD1L1Q9Y6D9 718 aa11.06□□□□□ -0.64
MTHFD1-210ENST00000555252 CHADO15335 359 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 HBP1O60381 514 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 BANF1O75531 89 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 PSMA2P25787 234 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 ATICP31939 592 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 GRIA2P42262 883 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 USP46P62068 366 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 OGDHQ02218 1023 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 LY6KQ17RY6 165 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 ATP13A4Q4VNC1 1196 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 ZNF667Q5HYK9 610 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 OGFRL1Q5TC84 451 aaPredicted RBP11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 NUDCD3Q8IVD9 361 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 AHI1Q8N157 1196 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 GDPD5Q8WTR4 605 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 BCO2Q9BYV7 579 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 NRDE2Q9H7Z3 1164 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 RPF1Q9H9Y2 349 aaKnown RBP11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 SPON1Q9HCB6 807 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 ALG13Q9NP73 1137 aaKnown RBP11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 C15orf38-AP3S2A0A0A6YYH1 394 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 A0A0G2JLL6 359 aaPredicted RBP11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 C3orf70A6NLC5 250 aaPredicted RBP11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 PRR5-ARHGAP8B1AHC4 643 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 ZBTB42B2RXF5 422 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 GOLGA8SH3BPF8 625 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 GOLGA8MH3BSY2 632 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 CXCL11O14625 94 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 USP1O94782 785 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 TMEM63AO94886 807 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 SMIM18P0DKX4 95 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 KRT3P12035 628 aa11.05□□□□□ -0.64
MTHFD1-210ENST00000555252 CNTFP26441 200 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms