RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 NLRP4Q96MN2 994 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 MXRA8Q9BRK3 442 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 CALN1Q9BXU9 219 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 TJP2Q9UDY2 1190 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 RSL24D1Q9UHA3 163 aaKnown RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 BARX2Q9UMQ3 279 aaPredicted RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 SSX2IPQ9Y2D8 614 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 ADAMTSL1Q8N6G6 1762 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 AIM2O14862 343 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 ZBTB14O43829 449 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 KLHL41O60662 606 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 MAP3K6O95382 1288 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 ITGBL1O95965 494 aaPredicted RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 COX4I1P13073 169 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 KDELR1P24390 212 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 STAT2P52630 851 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 PIGHQ14442 188 aaPredicted RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 TMEM179Q6ZVK1 233 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 POPDC2Q9HBU9 364 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 TBC1D22BQ9NU19 505 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 SLC17A6Q9P2U8 582 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 DOLKQ9UPQ8 538 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 CNTNAP4Q9C0A0 1308 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 E2F8A0AVK6 867 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 MCF2LO15068 1137 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 BIRC5O15392 142 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 LRCH4O75427 683 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 CSDE1O75534 798 aaKnown RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 KRT38O76015 456 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 ATP5BP06576 529 aaKnown RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 FGF3P11487 239 aaPredicted RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 CRHR1P34998 444 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 SLC25A11Q02978 314 aaKnown RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 MMRN1Q13201 1228 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 ADGRE1Q14246 886 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 DOK7Q18PE1 504 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 KCTD21Q4G0X4 260 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 ANKRD23Q86SG2 305 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 PATL1Q86TB9 770 aaKnown RBP12.64□□□□□ -0.39
ERBB3-219ENST00000551242 EMC1Q8N766 993 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 JOSD2Q8TAC2 188 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 PPP4R1Q8TF05 950 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 DDI1Q8WTU0 396 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 HSPH1Q92598 858 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 SLC35B4Q969S0 331 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 CCT7Q99832 543 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 ARHGAP26Q9UNA1 814 aa12.64□□□□□ -0.39
ERBB3-219ENST00000551242 CNTNAP2Q9UHC6 1331 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 SPAG6O75602 509 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 C4BPAP04003 597 aaKnown RBP12.63□□□□□ -0.39
ERBB3-219ENST00000551242 NLRP11P59045 1033 aaKnown RBP12.63□□□□□ -0.39
ERBB3-219ENST00000551242 BORAQ6PGQ7 559 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 POTEHQ6S545 545 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 Q6ZNX1 250 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 LPCAT2Q7L5N7 544 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 ARCQ7LC44 396 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 TRIML2Q8N7C3 387 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 GIPC3Q8TF64 312 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 KCNK16Q96T55 309 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 PKP2Q99959 881 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 TUT1Q9H6E5 874 aaKnown RBP12.63□□□□□ -0.39
ERBB3-219ENST00000551242 RRN3Q9NYV6 651 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 RIMS3Q9UJD0 308 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 ZNF180Q9UJW8 692 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 COL5A3P25940 1745 aaPredicted RBP12.63□□□□□ -0.39
ERBB3-219ENST00000551242 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 CALB1P05937 261 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 COL6A2P12110 1019 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 XRCC1P18887 633 aaPredicted RBP12.63□□□□□ -0.39
ERBB3-219ENST00000551242 THOP1P52888 689 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 PKNOX1P55347 436 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 FLOT2Q14254 428 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 PSMD6Q15008 389 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 NRF1Q16656 503 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 N4BP2L1Q5TBK1 243 aaPredicted RBP12.63□□□□□ -0.39
ERBB3-219ENST00000551242 UNC5AQ6ZN44 842 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 ERI1Q8IV48 349 aaKnown RBP12.63□□□□□ -0.39
ERBB3-219ENST00000551242 UNC5BQ8IZJ1 945 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 KCTD6Q8NC69 237 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 TSPAN14Q8NG11 270 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 AGR3Q8TD06 166 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 SORT1Q99523 831 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 OXCT2Q9BYC2 517 aaPredicted RBP12.63□□□□□ -0.39
ERBB3-219ENST00000551242 QTRT2Q9H974 415 aaKnown RBP12.63□□□□□ -0.39
ERBB3-219ENST00000551242 PI4KBQ9UBF8 816 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 EMCNQ9ULC0 261 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 AFG3L2Q9Y4W6 797 aa12.63□□□□□ -0.39
ERBB3-219ENST00000551242 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
ERBB3-219ENST00000551242 SH3PXD2BA1X283 911 aa12.62□□□□□ -0.39
ERBB3-219ENST00000551242 TRIM43BA6NCK2 446 aa12.62□□□□□ -0.39
ERBB3-219ENST00000551242 APRTP07741 180 aa12.62□□□□□ -0.39
ERBB3-219ENST00000551242 SERPINB5P36952 375 aa12.62□□□□□ -0.39
ERBB3-219ENST00000551242 MLH1P40692 756 aa12.62□□□□□ -0.39
ERBB3-219ENST00000551242 NUDT2P50583 147 aa12.62□□□□□ -0.39
ERBB3-219ENST00000551242 PPM1LQ5SGD2 360 aa12.62□□□□□ -0.39
ERBB3-219ENST00000551242 ZBTB41Q5SVQ8 909 aa12.62□□□□□ -0.39
ERBB3-219ENST00000551242 ITPRIPL1Q6GPH6 555 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms