RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 EIF3LQ9Y262 564 aaKnown RBP6.57□□□□□ -1.36
SIK3-212ENST00000488337 TRPM3Q9HCF6 1732 aaPredicted RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 KDM3BQ7LBC6 1761 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 SSU72P8A0A1W2PR75 194 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 LACTBL1A8MY62 500 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 USP17L12C9JPN9 530 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 USP17L21D6R901 530 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 H3BMQ9 156 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 TNPO2O14787 897 aaKnown RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 ST8SIA5O15466 376 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 PRLP01236 227 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 EEF2P13639 858 aaKnown RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 CCDC130P13994 396 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 PTX3P26022 381 aaPredicted RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 CDH5P33151 784 aaPredicted RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 CLCNKBP51801 687 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 STRN3Q13033 797 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 CCNIQ14094 377 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 SLC15A2Q16348 729 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 PDK4Q16654 411 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 EARS2Q5JPH6 523 aaKnown RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 C12orf60Q5U649 245 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 ARL6IP4Q66PJ3 421 aaKnown RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 HAUS6Q7Z4H7 955 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 SLFN11Q7Z7L1 901 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 GPIHBP1Q8IV16 184 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 CHERPQ8IWX8 916 aaKnown RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 ULK2Q8IYT8 1036 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 ASCC1Q8N9N2 400 aaKnown RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 BAP1Q92560 729 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 GJD4Q96KN9 370 aaPredicted RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 COG8Q96MW5 612 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 SDHAF3Q9NRP4 125 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 KLQ9UEF7 1012 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 ATP8B3O60423 1300 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 NRCAMQ92823 1304 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 MARF1Q9Y4F3 1742 aaKnown RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 CFAP99D6REC4 459 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 ATP6V1B1P15313 513 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 CPOXP36551 454 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 OR3A3P47888 321 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 SLC9A3P48764 834 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 MLLT10P55197 1068 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 XKR5Q6UX68 686 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 RNF19BQ6ZMZ0 732 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 BLIDQ8IZY5 108 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 CDC26Q8NHZ8 85 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 GTF3C2Q8WUA4 911 aaPredicted RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 CALML4Q96GE6 196 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 CNOT6LQ96LI5 555 aaKnown RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 MOGAT1Q96PD6 335 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 MCMBPQ9BTE3 642 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 HEMGNQ9BXL5 484 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 NTN4Q9HB63 628 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 PAQR5Q9NXK6 330 aaPredicted RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 SIK3Q9Y2K2 1263 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 NOC2LQ9Y3T9 749 aaKnown RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 FOXN3O00409 490 aaPredicted RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 GNRH1P01148 92 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 ERBB2P04626 1255 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 TSPY3P0CV98 308 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 TSPY8P0CW00 308 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 EIF4A3P38919 411 aaKnown RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 SLC1A4P43007 532 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 NDST2P52849 883 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 PTENP60484 403 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 TSPY1Q01534 308 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 RAD51Q06609 339 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 CDK10Q15131 360 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 PLA2G4EQ3MJ16 856 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 PLEKHA7Q6IQ23 1121 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 TRAF7Q6Q0C0 670 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 RRAGAQ7L523 313 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 AMIGO2Q86SJ2 522 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 PM20D2Q8IYS1 436 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 NRBF2Q96F24 287 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 ZNF512Q96ME7 567 aaPredicted RBP6.56□□□□□ -1.36
SIK3-212ENST00000488337 TSGA13Q96PP4 275 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 BEGAINQ9BUH8 593 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 SLC4A5Q9BY07 1137 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 TRIM15Q9C019 465 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 LHX5Q9H2C1 402 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 RAD21L1Q9H4I0 556 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 SLCO1B3Q9NPD5 702 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 PCDH12Q9NPG4 1184 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 CPNE7Q9UBL6 633 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 RNF11Q9Y3C5 154 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 AUP1Q9Y679 476 aa6.56□□□□□ -1.36
SIK3-212ENST00000488337 TCRBV5S4A2TA0A5A2 114 aa6.55□□□□□ -1.36
SIK3-212ENST00000488337 J3QRK9 145 aa6.55□□□□□ -1.36
SIK3-212ENST00000488337 CAMTA2O94983 1202 aa6.55□□□□□ -1.36
SIK3-212ENST00000488337 HMGN1P05114 100 aa6.55□□□□□ -1.36
SIK3-212ENST00000488337 TRIM23P36406 574 aa6.55□□□□□ -1.36
SIK3-212ENST00000488337 FCHO2Q0JRZ9 810 aa6.55□□□□□ -1.36
SIK3-212ENST00000488337 RRP1BQ14684 758 aaKnown RBP6.55□□□□□ -1.36
SIK3-212ENST00000488337 EXOC3L4Q17RC7 722 aa6.55□□□□□ -1.36
SIK3-212ENST00000488337 TRIM16LQ309B1 348 aa6.55□□□□□ -1.36
SIK3-212ENST00000488337 ZBED5Q49AG3 693 aa6.55□□□□□ -1.36
SIK3-212ENST00000488337 UBE2UQ5VVX9 321 aa6.55□□□□□ -1.36
SIK3-212ENST00000488337 OTOAQ7RTW8 1153 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms