RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 ACOT1Q86TX2 421 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 C12orf56Q8IXR9 622 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 SLC2A14Q8TDB8 520 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 RNF25Q96BH1 459 aaPredicted RBP12.42□□□□□ -0.42
CNOT4-208ENST00000465721 TNIP3Q96KP6 325 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 GPR174Q9BXC1 333 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 FBXO44Q9H4M3 255 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 NMUR1Q9HB89 426 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 DKK4Q9UBT3 224 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 LSM7Q9UK45 103 aaKnown RBP12.42□□□□□ -0.42
CNOT4-208ENST00000465721 FBXO10Q9UK96 956 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 FNDC3AQ9Y2H6 1198 aaKnown RBP12.42□□□□□ -0.42
CNOT4-208ENST00000465721 STON1Q9Y6Q2 735 aa12.42□□□□□ -0.42
CNOT4-208ENST00000465721 ZNF462Q96JM2 2506 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 LRRIQ3A6PVS8 624 aaPredicted RBP12.41□□□□□ -0.42
CNOT4-208ENST00000465721 HHLA1C9JL84 531 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 MDM4O15151 490 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 CER1O95813 267 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 PENKP01210 267 aaPredicted RBP12.41□□□□□ -0.42
CNOT4-208ENST00000465721 PDCP20941 246 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 ATP5C1P36542 298 aaKnown RBP12.41□□□□□ -0.42
CNOT4-208ENST00000465721 IL12RB1P42701 662 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 MAP3K7CLP57077 242 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 SNRPFP62306 86 aaKnown RBP12.41□□□□□ -0.42
CNOT4-208ENST00000465721 NCOA4Q13772 614 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 GEN1Q17RS7 908 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 BMT2Q1RMZ1 405 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 ZNF667Q5HYK9 610 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 KLHDC10Q6PID8 442 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 TMPRSS7Q7RTY8 843 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 NELFCDQ8IXH7 590 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 CADM4Q8NFZ8 388 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 BHMTQ93088 406 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 PHF12Q96QT6 1004 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 PRDM16Q9HAZ2 1276 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 SCUBE2Q9NQ36 999 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 ITM2CQ9NQX7 267 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.41□□□□□ -0.428e-8■■■■■ 44.9
CNOT4-208ENST00000465721 FAM49BQ9NUQ9 324 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 PLK2Q9NYY3 685 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 KIAA1522Q9P206 1035 aaPredicted RBP12.41□□□□□ -0.42
CNOT4-208ENST00000465721 SCML2Q9UQR0 700 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 SLC27A6Q9Y2P4 619 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 MAST4O15021 2626 aa12.41□□□□□ -0.42
CNOT4-208ENST00000465721 PHACTR2O75167 634 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 CILPO75339 1184 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 STC2O76061 302 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 IGLV3-19P01714 112 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 C4BPAP04003 597 aaKnown RBP12.4□□□□□ -0.42
CNOT4-208ENST00000465721 ACO1P21399 889 aaKnown RBP12.4□□□□□ -0.42
CNOT4-208ENST00000465721 MATKP42679 507 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 NASPP49321 788 aaPredicted RBP12.4□□□□□ -0.42
CNOT4-208ENST00000465721 TPMTP51580 245 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 NDST1P52848 882 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 COPAP53621 1224 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 MFAP3P55082 362 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 CLDN10P78369 228 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 GOLGA8FQ08AF8 430 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 GOLGA8DPQ0D2H9 430 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 PDAP1Q13442 181 aaKnown RBP12.4□□□□□ -0.42
CNOT4-208ENST00000465721 BIRC3Q13489 604 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 STARD3Q14849 445 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 DCAF12L1Q5VU92 463 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 FYB2Q5VWT5 728 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 CLEC20AQ6ZU45 233 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 CRYBG2Q8N1P7 616 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 C12orf29Q8N999 325 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 SPRYD3Q8NCJ5 442 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 C1orf216Q8TAB5 229 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 HNRNPLLQ8WVV9 542 aaKnown RBP12.4□□□□□ -0.42
CNOT4-208ENST00000465721 LRRC27Q9C0I9 530 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 MIR1-1HGQ9H1L0 117 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 CUEDC2Q9H467 287 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 GAREM1Q9H706 876 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 TM7SF3Q9NS93 570 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.4□□□□□ -0.42
CNOT4-208ENST00000465721 THAP10Q9P2Z0 257 aaPredicted RBP12.4□□□□□ -0.42
CNOT4-208ENST00000465721 NUDT5Q9UKK9 219 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 SLCO1B1Q9Y6L6 691 aa12.4□□□□□ -0.42
CNOT4-208ENST00000465721 DOCK9Q9BZ29 2069 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 A0A1W2PQH9 124 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 METTL12A8MUP2 240 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 BCAT2O15382 392 aaPredicted RBP12.39□□□□□ -0.43
CNOT4-208ENST00000465721 FLRT2O43155 660 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 KLKB1P03952 638 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 ATXN1LP0C7T5 689 aaKnown RBP12.39□□□□□ -0.43
CNOT4-208ENST00000465721 FAM200BP0CF97 657 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 RARGP13631 454 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 SYT1P21579 422 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 ASPAP45381 313 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 DBX2Q6ZNG2 339 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 UNC13DQ70J99 1090 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 MARCH9Q86YJ5 346 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 RBBP8NLQ8NC74 664 aaPredicted RBP12.39□□□□□ -0.43
CNOT4-208ENST00000465721 PARD3BQ8TEW8 1205 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 SETD7Q8WTS6 366 aaKnown RBP12.39□□□□□ -0.43
CNOT4-208ENST00000465721 JAKMIP2Q96AA8 810 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 DHX58Q96C10 678 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 C7orf25Q9BPX7 421 aa12.39□□□□□ -0.43
CNOT4-208ENST00000465721 CGNQ9P2M7 1197 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms