RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TLN1Q9Y490 2541 aaKnown RBP14.75□□□□□ -0.05
SNX1-214ENST00000625244 A0A1B0GTQ1 180 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 IRF1P10914 325 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 COPAP53621 1224 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 CACNA2D1P54289 1103 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 UCNP55089 124 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 TFAMQ00059 246 aaKnown RBP14.75□□□□□ -0.05
SNX1-214ENST00000625244 PRAMEF14Q5SWL7 426 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 BROXQ5VW32 411 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 TPGS1Q6ZTW0 290 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 KBTBD7Q8WVZ9 684 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 TSC1Q92574 1164 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 PRCCQ92733 491 aaPredicted RBP14.75□□□□□ -0.05
SNX1-214ENST00000625244 PCED1BQ96HM7 432 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 C8orf48Q96LL4 319 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 SLITRK1Q96PX8 696 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 PLIN2Q99541 437 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 RAB34Q9BZG1 259 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 OSGEPQ9NPF4 335 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 TMEM30AQ9NV96 361 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 CDH9Q9ULB4 789 aa14.75□□□□□ -0.05
SNX1-214ENST00000625244 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.75□□□□□ -0.05
SNX1-214ENST00000625244 USP9YO00507 2555 aaPredicted RBP14.74□□□□□ -0.05
SNX1-214ENST00000625244 TULP1O00294 542 aaPredicted RBP14.74□□□□□ -0.05
SNX1-214ENST00000625244 GREM1O60565 184 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 PDGFRBP09619 1106 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 ACSL1P33121 698 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 DGKGP49619 791 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 ORC1Q13415 861 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 NT5DC4Q86YG4 428 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 CSGALNACT2Q8N6G5 542 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 LRRC52Q8N7C0 313 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 P2RY11Q96G91 374 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 HIC2Q96JB3 615 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 PCED1AQ9H1Q7 454 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 IKZF4Q9H2S9 585 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 CCSER2Q9H7U1 834 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 MARK1Q9P0L2 795 aa14.74□□□□□ -0.05
SNX1-214ENST00000625244 CHORDC1Q9UHD1 332 aaPredicted RBP14.74□□□□□ -0.05
SNX1-214ENST00000625244 IL18RAPO95256 599 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 PLA2G4BP0C869 781 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 ACADMP11310 421 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 GLDCP23378 1020 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 PCBP4P57723 403 aaKnown RBP14.73□□□□□ -0.05
SNX1-214ENST00000625244 POU5F1Q01860 360 aaKnown RBP14.73□□□□□ -0.05
SNX1-214ENST00000625244 ENPP2Q13822 863 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 SHBQ15464 509 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 HECTD3Q5T447 861 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 MYCT1Q8N699 235 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 SNRNP27Q8WVK2 155 aaKnown RBP14.73□□□□□ -0.05
SNX1-214ENST00000625244 BHMTQ93088 406 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 KCND2Q9NZV8 630 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 WDR35Q9P2L0 1181 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 THAP10Q9P2Z0 257 aaPredicted RBP14.73□□□□□ -0.05
SNX1-214ENST00000625244 CLCA2Q9UQC9 943 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 STYXL1Q9Y6J8 313 aa14.73□□□□□ -0.05
SNX1-214ENST00000625244 LAD1O00515 517 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 SYNCRIPO60506 623 aaKnown RBP14.72□□□□□ -0.05
SNX1-214ENST00000625244 KRT19P08727 400 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 ACO1P21399 889 aaKnown RBP14.72□□□□□ -0.05
SNX1-214ENST00000625244 YWHAQP27348 245 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 ZNF132P52740 706 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 VAC14Q08AM6 782 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 MAPRE1Q15691 268 aaKnown RBP14.72□□□□□ -0.05
SNX1-214ENST00000625244 ME3Q16798 604 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 MDH1BQ5I0G3 518 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 KIAA1614Q5VZ46 1190 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 LIMS2Q7Z4I7 341 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 ADAT2Q7Z6V5 191 aaKnown RBP14.72□□□□□ -0.05
SNX1-214ENST00000625244 EID2Q8N6I1 236 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 DCBLD1Q8N8Z6 715 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 MYCBPAPQ8TBZ2 947 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 GTF3C6Q969F1 213 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 FBXO32Q969P5 355 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 BIRC7Q96CA5 298 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 FIZ1Q96SL8 496 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 REEP2Q9BRK0 252 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 ORAI3Q9BRQ5 295 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 PLK2Q9NYY3 685 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 ANKMY1Q9P2S6 941 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 SIX4Q9UIU6 781 aa14.72□□□□□ -0.05
SNX1-214ENST00000625244 TERTO14746 1132 aaKnown RBP14.71□□□□□ -0.05
SNX1-214ENST00000625244 KLK10O43240 276 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 DFNA5O60443 496 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 TSPAN3O60637 253 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 FSBPO95073 299 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 ITGAVP06756 1048 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 SCP2P22307 547 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 CD27P26842 260 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 GTF2BQ00403 316 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 INSM1Q01101 510 aaPredicted RBP14.71□□□□□ -0.05
SNX1-214ENST00000625244 NFATC3Q12968 1075 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 HYIQ5T013 277 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 SLFN12LQ6IEE8 588 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 HTR3DQ70Z44 454 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 DHX40Q8IX18 779 aaKnown RBP14.71□□□□□ -0.05
SNX1-214ENST00000625244 CACTIN-AS1Q8N1I8 211 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 ZSWIM2Q8NEG5 633 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 SAP25Q8TEE9 199 aa14.71□□□□□ -0.05
SNX1-214ENST00000625244 RFFLQ8WZ73 363 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms