RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 FAM189BP81408 668 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 TSPY1Q01534 308 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 RNASELQ05823 741 aaKnown RBP9.13□□□□□ -0.95
SMAD4-206ENST00000588860 ZNF844Q08AG5 666 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 IFFO1Q0D2I5 559 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 GPS1Q13098 491 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 SLMAPQ14BN4 828 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 TERF2Q15554 542 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 OASLQ15646 514 aaKnown RBP9.13□□□□□ -0.95
SMAD4-206ENST00000588860 CA9Q16790 459 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 P3H1Q32P28 736 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 ERMARDQ5T6L9 678 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 DENND2CQ68D51 928 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 C1orf228Q6PIY5 440 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 RHBDF2Q6PJF5 856 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 NPNTQ6UXI9 565 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 STRADAQ7RTN6 431 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 ZNF280BQ86YH2 543 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 MAP7D3Q8IWC1 876 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 GLIS1Q8NBF1 620 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 OR2W6PQ8NHA6 318 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 SLC35B2Q8TB61 432 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 SEPT8Q92599 483 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 CENPIQ92674 756 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-206ENST00000588860 SUSD3Q96L08 255 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 DEFB118Q96PH6 123 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 SLC2A13Q96QE2 648 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 ACBD6Q9BR61 282 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 TMEM121Q9BTD3 319 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 C11orf84Q9BUA3 381 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-206ENST00000588860 RHOBTB2Q9BYZ6 727 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 PCDH9Q9HC56 1237 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 PCDH18Q9HCL0 1135 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 TBC1D13Q9NVG8 400 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 GOLGA6AQ9NYA3 693 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 SAE1Q9UBE0 346 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-206ENST00000588860 NFS1Q9Y697 457 aa9.13□□□□□ -0.95
SMAD4-206ENST00000588860 LTBP2Q14767 1821 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 KIAA1671Q9BY89 1806 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 VCANP13611 3396 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 NUP205Q92621 2012 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 SYNJ2BP-COX16A0A087WUM0 186 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 H7C0C1 242 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 DNALI1O14645 258 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 APOL1O14791 398 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 PQBP1O60828 265 aaKnown RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 DDHD2O94830 711 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 ENDOD1O94919 500 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 IFNB1P01574 187 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 USP17L7P0C7H9 530 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 BDNFP23560 247 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 NOS2P35228 1153 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 RDXP35241 583 aaKnown RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 PLA2G5P39877 138 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 ATP5OP48047 213 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 ATXN1P54253 815 aaKnown RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 DAOAP59103 153 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 YWHAZP63104 245 aaKnown RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 ROR1Q01973 937 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 DSC1Q08554 894 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 MTFR1Q15390 333 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 MAPRE1Q15691 268 aaKnown RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 SLC25A52Q3SY17 297 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 DCAF6Q58WW2 860 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 ANKRD20A8PQ5CZ79 823 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 PPP6R3Q5H9R7 873 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 FAM171BQ6P995 826 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 HFE2Q6ZVN8 426 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 GPRIN1Q7Z2K8 1008 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 COLGALT2Q8IYK4 626 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 ABI1Q8IZP0 508 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 CCDC185Q8N715 623 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 ZMIZ2Q8NF64 920 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 OR10T2Q8NGX3 314 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 FAM76AQ8TAV0 307 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 RSAD2Q8WXG1 361 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 RNF157Q96PX1 679 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 KCTD15Q96SI1 283 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 TMEM209Q96SK2 561 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 KCNK16Q96T55 309 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 PKMYT1Q99640 499 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 HTATIP2Q9BUP3 242 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 ADAM33Q9BZ11 813 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 RNF208Q9H0X6 261 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 EPB41L4BQ9H329 900 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 PABPC3Q9H361 631 aaKnown RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 CENPHQ9H3R5 247 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 DHX35Q9H5Z1 703 aaKnown RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 C10orf88Q9H8K7 445 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 TMBIM4Q9HC24 238 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 PAK6Q9NQU5 681 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 CNGB3Q9NQW8 809 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 TMEM30AQ9NV96 361 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 TMLHEQ9NVH6 421 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 DNAJC17Q9NVM6 304 aaKnown RBP9.12□□□□□ -0.95
SMAD4-206ENST00000588860 TMEM161AQ9NX61 479 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 COX16Q9P0S2 106 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 KANSL3Q9P2N6 904 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 ADAM21Q9UKJ8 722 aa9.12□□□□□ -0.95
SMAD4-206ENST00000588860 LRFN2Q9ULH4 789 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms