RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SLC1A1P43005 524 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 COG2Q14746 738 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 TMEM132AQ24JP5 1023 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 NBPF12Q5TAG4 269 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-206ENST00000561781 HIPK4Q8NE63 616 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 INO80BQ9C086 356 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-206ENST00000561781 STRIP2Q9ULQ0 834 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 TRIM64CA6NLI5 447 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 I3L4J1 428 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 CCDC130P13994 396 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 PSMC3P17980 439 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 ESRRGP62508 458 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 CD300CQ08708 224 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 MOGQ16653 247 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 ITIH5Q86UX2 942 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 CATSPER3Q86XQ3 398 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 MCF2L2Q86YR7 1114 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 CCDC124Q96CT7 223 aaKnown RBP19.26■□□□□ 0.67
RAB40C-206ENST00000561781 C7orf26Q96N11 449 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 KLF6Q99612 283 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-206ENST00000561781 RIOX1Q9H6W3 641 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 RABL2AQ9UBK7 228 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-206ENST00000561781 ERGIC3Q9Y282 383 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 TMA7Q9Y2S6 64 aaKnown RBP19.26■□□□□ 0.67
RAB40C-206ENST00000561781 IFT52Q9Y366 437 aa19.26■□□□□ 0.67
RAB40C-206ENST00000561781 FRMPD2Q68DX3 1309 aaPredicted RBP19.26■□□□□ 0.67
RAB40C-206ENST00000561781 USP17L5A8MUK1 530 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 F5H6K3 240 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 hCG_1984214I3L0E3 225 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 PSMD12O00232 456 aaPredicted RBP19.25■□□□□ 0.67
RAB40C-206ENST00000561781 UGT1A9O60656 530 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 SGPL1O95470 568 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 UGT1A6P19224 532 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 UGT1A1P22309 533 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 UGT1A4P22310 534 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 KLRC2P26717 231 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 ADSSP30520 456 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 UGT1A3P35503 534 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 UGT1A5P35504 534 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 NT5C2P49902 561 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 HNRNPFP52597 415 aaKnown RBP19.25■□□□□ 0.67
RAB40C-206ENST00000561781 ALDH18A1P54886 795 aaKnown RBP19.25■□□□□ 0.67
RAB40C-206ENST00000561781 CCNG2Q16589 344 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 C6orf52Q5T4I8 152 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 MOB2Q70IA6 237 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 GPR141Q7Z602 305 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 SULF1Q8IWU6 871 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 CCDC33Q8N5R6 958 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 LMO3Q8TAP4 145 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 TBC1D15Q8TC07 691 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 UGT1A7Q9HAW7 530 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 UGT1A10Q9HAW8 530 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 UGT1A8Q9HAW9 530 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 TTC34A8MYJ7 566 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 KPNA4O00629 521 aaPredicted RBP19.25■□□□□ 0.67
RAB40C-206ENST00000561781 LPXNO60711 386 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 PIAS1O75925 651 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 H6PDO95479 791 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 KCNA2P16389 499 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 TCEA1P23193 301 aaKnown RBP19.25■□□□□ 0.67
RAB40C-206ENST00000561781 GSTA5Q7RTV2 222 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 LDHDQ86WU2 507 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 TICAM1Q8IUC6 712 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 ARHGEF19Q8IW93 802 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 TAMM41Q96BW9 452 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 C12orf43Q96C57 262 aaKnown RBP19.25■□□□□ 0.67
RAB40C-206ENST00000561781 DCUN1D5Q9BTE7 237 aa19.25■□□□□ 0.67
RAB40C-206ENST00000561781 KRBA1A5PL33 1030 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 SFI1A8K8P3 1242 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 S100BP04271 92 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-206ENST00000561781 GZMAP12544 262 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 JAK1P23458 1154 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 ETV4P43268 484 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 CYP2A13Q16696 494 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 SHROOM1Q2M3G4 852 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-206ENST00000561781 TRIM16LQ309B1 348 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 FRA10AC1Q70Z53 315 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 CLVS1Q8IUQ0 354 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-206ENST00000561781 ANKMY2Q8IV38 441 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 OR7G1Q8NGA0 311 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 TTC17Q96AE7 1141 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 TEPSINQ96N21 525 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 TDRD1Q9BXT4 1180 aaKnown RBP19.24■□□□□ 0.67
RAB40C-206ENST00000561781 DNM3Q9UQ16 869 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 EMSYQ7Z589 1322 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 XPO1O14980 1071 aaKnown RBP19.24■□□□□ 0.67
RAB40C-206ENST00000561781 BMP10O95393 424 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 KRT75O95678 551 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 RFX1P22670 979 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 CYP2J2P51589 502 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 COPAP53621 1224 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 MTMR2Q13614 643 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 HSF5Q4G112 596 aaPredicted RBP19.24■□□□□ 0.67
RAB40C-206ENST00000561781 RALGPS1Q5JS13 557 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 ADGRD1Q6QNK2 874 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 EPS8L1Q8TE68 723 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 TRUB1Q8WWH5 349 aaKnown RBP19.24■□□□□ 0.67
RAB40C-206ENST00000561781 NLRP7Q8WX94 980 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 FERMT1Q9BQL6 677 aa19.24■□□□□ 0.67
RAB40C-206ENST00000561781 IDI2Q9BXS1 227 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms