RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 TMEM102Q8N9M5 508 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-206ENST00000476391 ANKK1Q8NFD2 765 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 KAT5Q92993 513 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 NKD2Q969F2 451 aaPredicted RBP14.29□□□□□ -0.12
HDAC1-206ENST00000476391 COG8Q96MW5 612 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 MROQ9BYG7 248 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 GPRC5DQ9NZD1 345 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 SEPT3Q9UH03 358 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 VPS28Q9UK41 221 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 CDC14AQ9UNH5 594 aa14.29□□□□□ -0.12
HDAC1-206ENST00000476391 CCDC195A0A1B0GUA6 201 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 GRIN3BO60391 1043 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 SNAP91O60641 907 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 SPAG6O75602 509 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 MFAP3P55082 362 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 MRPS5P82675 430 aaKnown RBP14.28□□□□□ -0.12
HDAC1-206ENST00000476391 E2F2Q14209 437 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 NKX1-1Q15270 411 aaPredicted RBP14.28□□□□□ -0.12
HDAC1-206ENST00000476391 FAM209AQ5JX71 171 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 PDPK2PQ6A1A2 396 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 KRT27Q7Z3Y8 459 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 SETD3Q86TU7 594 aaPredicted RBP14.28□□□□□ -0.12
HDAC1-206ENST00000476391 MCOLN2Q8IZK6 566 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 PDIK1LQ8N165 341 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 NAT8LQ8N9F0 302 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 MINDY2Q8NBR6 621 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 DDX1Q92499 740 aaKnown RBP14.28□□□□□ -0.12
HDAC1-206ENST00000476391 ATP2A3Q93084 1043 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 RIC8BQ9NVN3 520 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 DNAJC28Q9NX36 388 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 RBMX2Q9Y388 322 aaKnown RBP14.28□□□□□ -0.12
HDAC1-206ENST00000476391 ZHX2Q9Y6X8 837 aa14.28□□□□□ -0.12
HDAC1-206ENST00000476391 CYP3A7-CYP3A51PA0A087WV96 503 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 PMM2O15305 246 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 KRT37O76014 449 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 RSL1D1O76021 490 aaKnown RBP14.27□□□□□ -0.12
HDAC1-206ENST00000476391 PARNO95453 639 aaKnown RBP14.27□□□□□ -0.12
HDAC1-206ENST00000476391 EIF2AK2P19525 551 aaKnown RBP14.27□□□□□ -0.12
HDAC1-206ENST00000476391 CYP3A7P24462 503 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 GABRB3P28472 473 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 PEX3P56589 373 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 ANGEL2Q5VTE6 544 aaKnown RBP14.27□□□□□ -0.12
HDAC1-206ENST00000476391 PLEKHA7Q6IQ23 1121 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 ANKRD26P1Q6NSI1 321 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 DNAJC10Q8IXB1 793 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 RCOR2Q8IZ40 523 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 FIBCD1Q8N539 461 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 MYCT1Q8N699 235 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 ATP6V0D2Q8N8Y2 350 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 GRIN3AQ8TCU5 1115 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 MBOAT7Q96N66 472 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 APOL6Q9BWW8 343 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 CD209Q9NNX6 404 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 SEL1LQ9UBV2 794 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 ZNF652Q9Y2D9 606 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 COL24A1Q17RW2 1714 aa14.27□□□□□ -0.12
HDAC1-206ENST00000476391 TCRBV9S1A1TA0A576 114 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 C7orf72A4D263 438 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 TRIM49D1C9J1S8 452 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 SNRPAP09012 282 aaKnown RBP14.27□□□□□ -0.13
HDAC1-206ENST00000476391 ALOX5P09917 674 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 COX4I1P13073 169 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 CD58P19256 250 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 IREB2P48200 963 aaKnown RBP14.27□□□□□ -0.13
HDAC1-206ENST00000476391 TAS2R40P59535 323 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 PSMC1P62191 440 aaKnown RBP14.27□□□□□ -0.13
HDAC1-206ENST00000476391 TRPC3Q13507 836 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 LSM12Q3MHD2 195 aaKnown RBP14.27□□□□□ -0.13
HDAC1-206ENST00000476391 LGSNQ5TDP6 509 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 SLC26A11Q86WA9 606 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 TTC30AQ86WT1 665 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 CPT1BQ92523 772 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 KREMEN1Q96MU8 473 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 TMEM79Q9BSE2 394 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 ANKRD60Q9BZ19 345 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 CEP44Q9C0F1 390 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 CDH19Q9H159 772 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 BCAS3Q9H6U6 928 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 CXorf21Q9HAI6 301 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 PARVGQ9HBI0 331 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 ANLNQ9NQW6 1124 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 XPNPEP1Q9NQW7 623 aa14.27□□□□□ -0.13
HDAC1-206ENST00000476391 LOC100653049A0A140TA62 436 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 A0A1W2PPW3 197 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 FAM155AB1AL88 458 aaPredicted RBP14.26□□□□□ -0.13
HDAC1-206ENST00000476391 ERVV-1B6SEH8 477 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 SGK1O00141 431 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 KRT34O76011 436 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 MCF2P10911 925 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 TCEA1P23193 301 aaKnown RBP14.26□□□□□ -0.13
HDAC1-206ENST00000476391 MXI1P50539 228 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 VAMP7P51809 220 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 PPP3CAQ08209 521 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 ITGADQ13349 1161 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 MGAT5BQ3V5L5 792 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 SCARA3Q6AZY7 606 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 RINT1Q6NUQ1 792 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 MOXD1Q6UVY6 613 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 C16orf89Q6UX73 402 aa14.26□□□□□ -0.13
HDAC1-206ENST00000476391 ZNF720Q7Z2F6 126 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms