RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 HDDC3Q8N4P3 179 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 Q8NFD4 153 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 KIF18AQ8NI77 898 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 SIN3AQ96ST3 1273 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 C9orf16Q9BUW7 83 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 NTMT1Q9BV86 223 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 PACSIN1Q9BY11 444 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 RAD21L1Q9H4I0 556 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 TFB2MQ9H5Q4 396 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 C8orf4Q9NR00 106 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 NINJ2Q9NZG7 142 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 PKD2L1Q9P0L9 805 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 MBD1Q9UIS9 605 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 TTC7AQ9ULT0 858 aaPredicted RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 PIN4Q9Y237 131 aaKnown RBP6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 PCDHA5Q9Y5H7 936 aa6.35□□□□□ -1.39
SMARCE1-208ENST00000474246 CYP3A7-CYP3A51PA0A087WV96 503 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 TRIM43BA6NCK2 446 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 ZNF879B4DU55 563 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 H0YCG3 227 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 BACH1O14867 736 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 IFIT3O14879 490 aaKnown RBP6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 ADAMTS3O15072 1205 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 PTP4A3O75365 173 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 DNAJC8O75937 253 aaPredicted RBP6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 IVLP07476 585 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 PRG2P13727 222 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 PDCP20941 246 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 CYP3A7P24462 503 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 CCR1P32246 355 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 IL15P40933 162 aaPredicted RBP6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 TECP42680 631 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 ARCN1P48444 511 aaKnown RBP6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 CCR3P51677 355 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 CASP6P55212 293 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 ERVK-21P61565 698 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 ACVR2BQ13705 512 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 SPCS2Q15005 226 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 BCL2A1Q16548 175 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 MOGQ16653 247 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 CFAP157Q5JU67 520 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 GRTP1Q5TC63 336 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 SHEQ5VZ18 495 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 NEPROQ6NW34 567 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 CEP85Q6P2H3 762 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 INTS5Q6P9B9 1019 aaKnown RBP6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 APOA5Q6Q788 366 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 STX12Q86Y82 276 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 DPP10Q8N608 796 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 CREB3L4Q8TEY5 395 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 SYN2Q92777 582 aaPredicted RBP6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 TRIM43Q96BQ3 446 aaPredicted RBP6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 LRRC39Q96DD0 335 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 CDK19Q9BWU1 502 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 BRIP1Q9BX63 1249 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 MAGEH1Q9H213 219 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 CENPHQ9H3R5 247 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 ERVMER34-1Q9H9K5 563 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 SARS2Q9NP81 518 aaKnown RBP6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 USP36Q9P275 1121 aaKnown RBP6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 HMGXB4Q9UGU5 601 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 TLK1Q9UKI8 766 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 AOX1Q06278 1338 aa6.34□□□□□ -1.39
SMARCE1-208ENST00000474246 C1orf232A0A0U1RR37 186 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 TMEM247A6NEH6 219 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 H7C1D1 291 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 CASC3O15234 703 aaKnown RBP6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 KRT86O43790 486 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 GGPS1O95749 300 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 URODP06132 367 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 PNMA6AP0CW24 399 aaPredicted RBP6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 NR2F1P10589 423 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 CASTP20810 708 aaKnown RBP6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 GLRA2P23416 452 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 CFL1P23528 166 aaKnown RBP6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 PTBP1P26599 531 aaKnown RBP eCLIP6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 ALDH4A1P30038 563 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 PDIA3P30101 505 aaKnown RBP6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 PCP4P48539 62 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 ARHGAP8P85298 464 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 TFF2Q03403 129 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 DNAJC3Q13217 504 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 CASP8Q14790 479 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 FLYWCH1Q4VC44 716 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 PPP1R26Q5T8A7 1209 aaPredicted RBP6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 HFE2Q6ZVN8 426 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 ZNF765Q7L2R6 523 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 KRT25Q7Z3Z0 450 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 PSTKQ8IV42 348 aaKnown RBP6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 MCEMP1Q8IX19 187 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 SP8Q8IXZ3 490 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 SPATA20Q8TB22 786 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 GPT2Q8TD30 523 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 ZUFSPQ96AP4 578 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 NOX5Q96PH1 765 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 OSBPL9Q96SU4 736 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 PRPF18Q99633 342 aaKnown RBP6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 CRNKL1Q9BZJ0 848 aaKnown RBP6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 VPS16Q9H269 839 aa6.34□□□□□ -1.4
SMARCE1-208ENST00000474246 ZNF576Q9H609 170 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms