RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 HTATIP2Q9BUP3 242 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 THSD1Q9NS62 852 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 NCKIPSDQ9NZQ3 722 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 FZD4Q9ULV1 537 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 SIRT4Q9Y6E7 314 aaPredicted RBP2.44□□□□□ -2.02
CCDC39-203ENST00000473854 MRPL42Q9Y6G3 142 aaKnown RBP2.44□□□□□ -2.02
CCDC39-203ENST00000473854 FER1L4A9Z1Z3 1794 aa2.44□□□□□ -2.02
CCDC39-203ENST00000473854 DCAF1Q9Y4B6 1507 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP2.43□□□□□ -2.02
CCDC39-203ENST00000473854 A0A0G2JK05 382 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 A8MVJ9 347 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 FYB1O15117 783 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 HOXA7P31268 230 aaPredicted RBP2.43□□□□□ -2.02
CCDC39-203ENST00000473854 JAK3P52333 1124 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 UCP3P55916 312 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 TIRAPP58753 221 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 ZRSR1Q15695 479 aaKnown RBP2.43□□□□□ -2.02
CCDC39-203ENST00000473854 ST3GAL2Q16842 350 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 ZIK1Q3SY52 487 aaPredicted RBP2.43□□□□□ -2.02
CCDC39-203ENST00000473854 LCE3AQ5TA76 89 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 PRSS57Q6UWY2 283 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 RBM44Q6ZP01 1051 aaKnown RBP2.43□□□□□ -2.02
CCDC39-203ENST00000473854 ADGRF4Q8IZF3 695 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 MIER2Q8N344 545 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 UBXN4Q92575 508 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 MSI2Q96DH6 328 aaKnown RBP2.43□□□□□ -2.02
CCDC39-203ENST00000473854 P2RY11Q96G91 374 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 FAXDC2Q96IV6 333 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 VPS50Q96JG6 964 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 TEKT5Q96M29 485 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 SPRY4Q9C004 299 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 DCLK3Q9C098 648 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 PUS7LQ9H0K6 701 aaKnown RBP2.43□□□□□ -2.02
CCDC39-203ENST00000473854 GBA2Q9HCG7 927 aaPredicted RBP2.43□□□□□ -2.02
CCDC39-203ENST00000473854 TCF7L2Q9NQB0 619 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 CNNM1Q9NRU3 951 aa2.43□□□□□ -2.02
CCDC39-203ENST00000473854 KIR2DS5A0A0G2JLQ3 304 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 SLC22A23A1A5C7 686 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 PRR23AA6NEV1 266 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 OR6C75A6NL08 312 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 KIR2DS3K7RE56 304 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 KCNQ3O43525 872 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 HDCP19113 662 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 AZU1P20160 251 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 SLC11A2P49281 568 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 DSC1Q08554 894 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 TRAF2Q12933 501 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 COASYQ13057 564 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 MTA1Q13330 715 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 KCNJ12Q14500 433 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 INAVAQ3KP66 663 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 FAM83HQ6ZRV2 1179 aaPredicted RBP2.42□□□□□ -2.02
CCDC39-203ENST00000473854 FAM71DQ8N9W8 422 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 KAZALD1Q96I82 304 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 DUX5Q96PT3 197 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 WDR83Q9BRX9 315 aaKnown RBP2.42□□□□□ -2.02
CCDC39-203ENST00000473854 CINPQ9BW66 212 aaPredicted RBP2.42□□□□□ -2.02
CCDC39-203ENST00000473854 C1QTNF5Q9BXJ0 243 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 USP29Q9HBJ7 922 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 DNAJB11Q9UBS4 358 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 NKX1-2Q9UD57 310 aaPredicted RBP2.42□□□□□ -2.02
CCDC39-203ENST00000473854 SERPINB13Q9UIV8 391 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 MED16Q9Y2X0 877 aa2.42□□□□□ -2.02
CCDC39-203ENST00000473854 A0A1W2PPC1 479 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 SRRM3A6NNA2 597 aaPredicted RBP2.41□□□□□ -2.02
CCDC39-203ENST00000473854 H3BUI4 141 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 RRHO14718 337 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 PHGDHO43175 533 aaKnown RBP2.41□□□□□ -2.02
CCDC39-203ENST00000473854 UGDHO60701 494 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 IFNA2P01563 188 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 PRSS2P07478 247 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 CPA1P15085 419 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 ADRA1DP25100 572 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 HOXC13P31276 330 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 DLX5P56178 289 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 TIAL1Q01085 375 aaKnown RBP eCLIP2.41□□□□□ -2.02
CCDC39-203ENST00000473854 SMTNL2Q2TAL5 461 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 ODF3L2Q3SX64 289 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 PLA1AQ53H76 456 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 CCDC157Q569K6 752 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 KHDC1LQ5JSQ8 128 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 EFCAB2Q5VUJ9 269 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 C9orf57Q5W0N0 161 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 NUGGCQ68CJ6 796 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 PMS2CLQ68D20 193 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 LMBRD2Q68DH5 695 aaPredicted RBP2.41□□□□□ -2.02
CCDC39-203ENST00000473854 ISM2Q6H9L7 571 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 LHFPL2Q6ZUX7 228 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 CREB3L2Q70SY1 520 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 MUC20Q8N307 709 aaPredicted RBP2.41□□□□□ -2.02
CCDC39-203ENST00000473854 CTCFLQ8NI51 663 aaPredicted RBP2.41□□□□□ -2.02
CCDC39-203ENST00000473854 KAT2BQ92831 832 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 RETREG1Q9H6L5 497 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 MOV10Q9HCE1 1003 aaKnown RBP2.41□□□□□ -2.02
CCDC39-203ENST00000473854 IPO11Q9UI26 975 aaKnown RBP2.41□□□□□ -2.02
CCDC39-203ENST00000473854 PAXBP1Q9Y5B6 917 aa2.41□□□□□ -2.02
CCDC39-203ENST00000473854 SCRIBQ14160 1630 aa2.4□□□□□ -2.03
CCDC39-203ENST00000473854 PLSCR5A0PG75 271 aa2.4□□□□□ -2.03
CCDC39-203ENST00000473854 CLEC18AA5D8T8 446 aa2.4□□□□□ -2.03
CCDC39-203ENST00000473854 GAGE12JA6NER3 117 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms