RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 FGGP02679 453 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 SOD2P04179 222 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 VIMP08670 466 aaKnown RBP13.43□□□□□ -0.26
LINC00642-201ENST00000419459 ABCB4P21439 1286 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 DNAJB1P25685 340 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 RGS19P49795 217 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 CCNHP51946 323 aaPredicted RBP13.43□□□□□ -0.26
LINC00642-201ENST00000419459 CACNA2D1P54289 1103 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 BPIFB4P59827 614 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 BLMHQ13867 455 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 GOLGA7BQ2TAP0 167 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 SLC39A12Q504Y0 691 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 LLGL2Q6P1M3 1020 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 DENND1BQ6P3S1 775 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 CRYBG2Q8N1P7 616 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 TTC9BQ8N6N2 239 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 RFFLQ8WZ73 363 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 PRMT1Q99873 361 aaKnown RBP13.43□□□□□ -0.26
LINC00642-201ENST00000419459 ACBD6Q9BR61 282 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 AAASQ9NRG9 546 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 CHST7Q9NS84 486 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 TJP2Q9UDY2 1190 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 CYTH4Q9UIA0 394 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 CDY1Q9Y6F8 540 aa13.43□□□□□ -0.26
LINC00642-201ENST00000419459 E7ENQ6 273 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 UBOX5O94941 541 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 TMEM253P0C7T8 217 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 VDRP11473 427 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 PCSK1P29120 753 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 ATP5DP30049 168 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 PPM1AP35813 382 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 BMPR1AP36894 532 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 ATP11AP98196 1134 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 TAP1Q03518 808 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 ELAVL2Q12926 359 aaKnown RBP13.42□□□□□ -0.26
LINC00642-201ENST00000419459 FAM133BQ5BKY9 247 aaKnown RBP13.42□□□□□ -0.26
LINC00642-201ENST00000419459 CMPK2Q5EBM0 449 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 INTS6LQ5JSJ4 861 aaKnown RBP13.42□□□□□ -0.26
LINC00642-201ENST00000419459 PAQR9Q6ZVX9 377 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 PHLDB2Q86SQ0 1253 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 THEM5Q8N1Q8 247 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 TTC39CQ8N584 583 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 WDTC1Q8N5D0 677 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 STKLD1Q8NE28 680 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 MYLPFQ96A32 169 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 ZNF570Q96NI8 536 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 ZNF518BQ9C0D4 1074 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 ECT2Q9H8V3 914 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 ATMINO43313 823 aaPredicted RBP13.42□□□□□ -0.26
LINC00642-201ENST00000419459 GJB6O95452 261 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 SHBGP04278 402 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 CPB1P15086 417 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 CHRNA3P32297 505 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 NOMO3P69849 1222 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 MRPL58Q14197 206 aaKnown RBP13.42□□□□□ -0.26
LINC00642-201ENST00000419459 CNGA2Q16280 664 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 PSMD5Q16401 504 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 CCDC38Q502W7 563 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 ZNF280DQ6N043 979 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 DDX53Q86TM3 631 aaKnown RBP13.42□□□□□ -0.26
LINC00642-201ENST00000419459 KLHL29Q96CT2 875 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 KCNK16Q96T55 309 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 PKMYT1Q99640 499 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 TRIM51Q9BSJ1 452 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 MED10Q9BTT4 135 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 B3GNT5Q9BYG0 378 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 TRIM7Q9C029 511 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 NKX2-4Q9H2Z4 354 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 GOLPH3Q9H4A6 298 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 FAM124BQ9H5Z6 455 aaPredicted RBP13.42□□□□□ -0.26
LINC00642-201ENST00000419459 KRT82Q9NSB4 513 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 ABCF3Q9NUQ8 709 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 ABI2Q9NYB9 513 aaPredicted RBP13.42□□□□□ -0.26
LINC00642-201ENST00000419459 CDH9Q9ULB4 789 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 ARL2BPQ9Y2Y0 163 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 L3MBTL1Q9Y468 752 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 ATG2AQ2TAZ0 1938 aa13.42□□□□□ -0.26
LINC00642-201ENST00000419459 DDX3YO15523 660 aaKnown RBP13.41□□□□□ -0.26
LINC00642-201ENST00000419459 UNGP13051 313 aaPredicted RBP13.41□□□□□ -0.26
LINC00642-201ENST00000419459 BDNFP23560 247 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 OR1D2P34982 312 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 GLUD2P49448 558 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 ERVFC1P60507 584 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 TSPY1Q01534 308 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 KRT17Q04695 432 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 CCDC15Q0P6D6 951 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 PPP2R2DQ66LE6 453 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 ZDHHC24Q6UX98 284 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 ANKS3Q6ZW76 656 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 ZNF677Q86XU0 584 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 JAMLQ86YT9 394 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 ATAD1Q8NBU5 361 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 FBXO22Q8NEZ5 403 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 RNF25Q96BH1 459 aaPredicted RBP13.41□□□□□ -0.26
LINC00642-201ENST00000419459 RAB3IPQ96QF0 476 aaPredicted RBP13.41□□□□□ -0.26
LINC00642-201ENST00000419459 RXFP1Q9HBX9 757 aa13.41□□□□□ -0.26
LINC00642-201ENST00000419459 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.4□□□□□ -0.26
LINC00642-201ENST00000419459 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.4□□□□□ -0.26
LINC00642-201ENST00000419459 ARHGEF37A1IGU5 675 aa13.4□□□□□ -0.26
LINC00642-201ENST00000419459 WDR27A2RRH5 827 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms