RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 PTPN7P35236 360 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 STAT2P52630 851 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 MPP3Q13368 585 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 ATG14Q6ZNE5 492 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 RIT2Q99578 217 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 SLC9A2Q9UBY0 812 aa19.56■□□□□ 0.72
PRPF39-201ENST00000355765 FAF1Q9UNN5 650 aaPredicted RBP19.56■□□□□ 0.72
PRPF39-201ENST00000355765 H0YIN7 160 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 NELFEP18615 380 aaKnown RBP19.55■□□□□ 0.72
PRPF39-201ENST00000355765 PSMA2P25787 234 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 YWHAZP63104 245 aaKnown RBP19.55■□□□□ 0.72
PRPF39-201ENST00000355765 CDKL1Q00532 357 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 SMAD1Q15797 465 aaKnown RBP19.55■□□□□ 0.72
PRPF39-201ENST00000355765 C15orf39Q6ZRI6 1047 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 TMIGD2Q96BF3 282 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 COPS7BQ9H9Q2 264 aaPredicted RBP19.55■□□□□ 0.72
PRPF39-201ENST00000355765 GNEQ9Y223 722 aaKnown RBP19.55■□□□□ 0.72
PRPF39-201ENST00000355765 ASTN2O75129 1339 aaPredicted RBP19.55■□□□□ 0.72
PRPF39-201ENST00000355765 DCXO43602 365 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 STT3AP46977 705 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 TRMT10BQ6PF06 316 aaKnown RBP19.55■□□□□ 0.72
PRPF39-201ENST00000355765 DARS2Q6PI48 645 aaKnown RBP19.55■□□□□ 0.72
PRPF39-201ENST00000355765 BBS12Q6ZW61 710 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 ADGRF2Q8IZF7 708 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 NUP93Q8N1F7 819 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 SPATA18Q8TC71 538 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 TEKT1Q969V4 418 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 LRGUKQ96M69 825 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 PSMD13Q9UNM6 376 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 NUB1Q9Y5A7 615 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 CEPT1Q9Y6K0 416 aa19.55■□□□□ 0.72
PRPF39-201ENST00000355765 GOLGB1Q14789 3259 aaKnown RBP19.55■□□□□ 0.72
PRPF39-201ENST00000355765 DHX15O43143 795 aaKnown RBP19.54■□□□□ 0.72
PRPF39-201ENST00000355765 TSHRP16473 764 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 CDH2P19022 906 aaPredicted RBP19.54■□□□□ 0.72
PRPF39-201ENST00000355765 L1CAMP32004 1257 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 SLC1A6P48664 564 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 RPL26P61254 145 aaKnown RBP19.54■□□□□ 0.72
PRPF39-201ENST00000355765 ZACNQ401N2 412 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 SLC44A4Q53GD3 710 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 TRAPPC3LQ5T215 181 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 TEDDM1Q5T9Z0 273 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 IRGQQ8WZA9 623 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 HSPH1Q92598 858 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 CALN1Q9BXU9 219 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 MAN1C1Q9NR34 630 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 RAB6BQ9NRW1 208 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 TJP2Q9UDY2 1190 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 SORCS3Q9UPU3 1222 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 MCF2LO15068 1137 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 KDELR1P24390 212 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 IDH3AP50213 366 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 ARFGAP1Q8N6T3 406 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 FNDC8Q8TC99 324 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 EHMT1Q9H9B1 1298 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 PLAC1Q9HBJ0 212 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 HMX2A2RU54 273 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 MAP3K6O95382 1288 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 FAM58BPP0C7Q3 252 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 RFC1P35251 1148 aaPredicted RBP19.54■□□□□ 0.72
PRPF39-201ENST00000355765 PIGHQ14442 188 aaPredicted RBP19.54■□□□□ 0.72
PRPF39-201ENST00000355765 AHI1Q8N157 1196 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 ZNF696Q9H7X3 374 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 PI4KBQ9UBF8 816 aa19.54■□□□□ 0.72
PRPF39-201ENST00000355765 NLRP11P59045 1033 aaKnown RBP19.53■□□□□ 0.72
PRPF39-201ENST00000355765 KCNJ11Q14654 390 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 LGSNQ5TDP6 509 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 EMC1Q8N766 993 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 RNF148Q8N7C7 305 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 JOSD2Q8TAC2 188 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 SLC17A6Q9P2U8 582 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 ZNF831Q5JPB2 1677 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 TCRBV5S1A1TA0A578 114 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 XPO1O14980 1071 aaKnown RBP19.53■□□□□ 0.72
PRPF39-201ENST00000355765 LRCH4O75427 683 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 FBXO21O94952 628 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 C4BPAP04003 597 aaKnown RBP19.53■□□□□ 0.72
PRPF39-201ENST00000355765 GMPRP36959 345 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 MTTPP55157 894 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 SLC25A11Q02978 314 aaKnown RBP19.53■□□□□ 0.72
PRPF39-201ENST00000355765 CDK18Q07002 472 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 MMRN1Q13201 1228 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 RARS2Q5T160 578 aaKnown RBP19.53■□□□□ 0.72
PRPF39-201ENST00000355765 PRR5LQ6MZQ0 368 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 KIAA0319LQ8IZA0 1049 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 CMTM5Q96DZ9 223 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 YIPF2Q9BWQ6 316 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 NRDE2Q9H7Z3 1164 aa19.53■□□□□ 0.72
PRPF39-201ENST00000355765 PAIP2BQ9ULR5 123 aaKnown RBP19.53■□□□□ 0.72
PRPF39-201ENST00000355765 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.52■□□□□ 0.72
PRPF39-201ENST00000355765 E2F8A0AVK6 867 aa19.52■□□□□ 0.72
PRPF39-201ENST00000355765 TMEM221A6NGB7 291 aa19.52■□□□□ 0.72
PRPF39-201ENST00000355765 E9PBE3 544 aa19.52■□□□□ 0.72
PRPF39-201ENST00000355765 TBC1D12O60347 775 aa19.52■□□□□ 0.72
PRPF39-201ENST00000355765 KLHL41O60662 606 aa19.52■□□□□ 0.72
PRPF39-201ENST00000355765 CALB1P05937 261 aa19.52■□□□□ 0.72
PRPF39-201ENST00000355765 APOFQ13790 326 aa19.52■□□□□ 0.72
PRPF39-201ENST00000355765 MBLAC2Q68D91 279 aa19.52■□□□□ 0.72
PRPF39-201ENST00000355765 KRT27Q7Z3Y8 459 aa19.52■□□□□ 0.72
PRPF39-201ENST00000355765 KCTD6Q8NC69 237 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms