RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 DEPDC4Q8N2C3 294 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 CALML6Q8TD86 181 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 COX4I2Q96KJ9 171 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 SPATC1LQ9H0A9 340 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 PTPRHQ9HD43 1115 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 TXLNGQ9NUQ3 528 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 TRIP11Q15643 1979 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 CNOT3O75175 753 aaKnown RBP9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 MAFO75444 373 aaPredicted RBP9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 UNC5CO95185 931 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 S100A5P33763 92 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 NAMPTP43490 491 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 SLCO1A2P46721 670 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 MFAP3P55082 362 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 TNNC1P63316 161 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 STXBP2Q15833 593 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 SEZ6Q53EL9 994 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 CYP4V2Q6ZWL3 525 aaPredicted RBP9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 KBTBD2Q8IY47 623 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 ANKRD42Q8N9B4 389 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 GALNT6Q8NCL4 622 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 OR7G1Q8NGA0 311 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 ERP27Q96DN0 273 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 KCNH4Q9UQ05 1017 aa9.88□□□□□ -0.83
RBFOX1-201ENST00000311745 HNRNPDLO14979 420 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 SGTAO43765 313 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 ZC3H11AO75152 810 aaKnown RBP eCLIP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 HLA-DRAP01903 254 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 CDH3P22223 829 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 STT3AP46977 705 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 GSSP48637 474 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 MAP3K7CLP57077 242 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 NOP14P78316 857 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 OCRLQ01968 901 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 ZNF252P-AS1Q0IIN9 211 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 CUL1Q13616 776 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 GALNTL6Q49A17 601 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 RFWD3Q6PCD5 774 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 Q6ZNX1 250 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 IRGQQ8WZA9 623 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 HDAC2Q92769 488 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 TTC1Q99614 292 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 GPR20Q99678 358 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 GPATCH1Q9BRR8 931 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 UQCC2Q9BRT2 126 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 TMEM134Q9H6X4 195 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 RXFP1Q9HBX9 757 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 SEPT10Q9P0V9 454 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 FBXO40Q9UH90 709 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 PCYOX1Q9UHG3 505 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 SPEF1Q9Y4P9 236 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 MAD1L1Q9Y6D9 718 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 SCN4AP35499 1836 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 SNPHO15079 494 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 ICMTO60725 284 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 SNX2O60749 519 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 RNASEH1O60930 286 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 CST3P01034 146 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 DLATP10515 647 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 NR4A1P22736 598 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 RRM1P23921 792 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 IST1P53990 364 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 CENPCQ03188 943 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 TGFBIQ15582 683 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 HSDL1Q3SXM5 330 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 C2CD6Q53TS8 623 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 KLHDC10Q6PID8 442 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 ADAT2Q7Z6V5 191 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 ANKRD13AQ8IZ07 590 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 MCOLN2Q8IZK6 566 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 NUP93Q8N1F7 819 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 GALNT4Q8N4A0 578 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 EXD1Q8NHP7 514 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 TARS2Q9BW92 718 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 TRIM31Q9BZY9 425 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 TIMMDC1Q9NPL8 285 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 DNAJC17Q9NVM6 304 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 KLHL42Q9P2K6 505 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 ARL2BPQ9Y2Y0 163 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 SIGLEC16A6NMB1 481 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 E9PBE3 544 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 TBX10O75333 385 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 RFC1P35251 1148 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 GRIA2P42262 883 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 SLC34A1Q06495 639 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 PPP1R21Q6ZMI0 780 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 C3orf62Q6ZUJ4 267 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 AGGF1Q8N302 714 aaeCLIP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 BBS5Q8N3I7 341 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 ZNF564Q8TBZ8 553 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 ACMSDQ8TDX5 336 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 DACT3Q96B18 629 aaPredicted RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 TCF12Q99081 682 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 KLHL25Q9H0H3 589 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 LIN28AQ9H9Z2 209 aaKnown RBP9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 AAASQ9NRG9 546 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 SACM1LQ9NTJ5 587 aa9.87□□□□□ -0.83
RBFOX1-201ENST00000311745 PRKAG3Q9UGI9 489 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms