RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 DCP1BQ8IZD4 617 aaKnown RBP11.02□□□□□ -0.64
CLP1-201ENST00000302731 ABI1Q8IZP0 508 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 GLIS1Q8NBF1 620 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 HASPINQ8TF76 798 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 RTP4Q96DX8 246 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 FUBP3Q96I24 572 aaKnown RBP eCLIP11.02□□□□□ -0.64
CLP1-201ENST00000302731 TOX2Q96NM4 488 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 DEFB118Q96PH6 123 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 ROPN1BQ9BZX4 212 aaPredicted RBP11.02□□□□□ -0.64
CLP1-201ENST00000302731 CDC42EP4Q9H3Q1 356 aaKnown RBP11.02□□□□□ -0.64
CLP1-201ENST00000302731 DHX35Q9H5Z1 703 aaKnown RBP11.02□□□□□ -0.64
CLP1-201ENST00000302731 NRDE2Q9H7Z3 1164 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 ROPN1Q9HAT0 212 aaPredicted RBP11.02□□□□□ -0.64
CLP1-201ENST00000302731 TMEM30AQ9NV96 361 aa11.02□□□□□ -0.64
CLP1-201ENST00000302731 SAE1Q9UBE0 346 aaPredicted RBP11.02□□□□□ -0.64
CLP1-201ENST00000302731 PTPRDP23468 1912 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 YJEFN3A6XGL0 299 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 E7ENQ6 273 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 M0QYT0 321 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 B4GALT3O60512 393 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 ZNF189O75820 626 aaPredicted RBP11.02□□□□□ -0.65
CLP1-201ENST00000302731 TTC4O95801 387 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 IFNB1P01574 187 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 CCL5P13501 91 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 IBSPP21815 317 aaPredicted RBP11.02□□□□□ -0.65
CLP1-201ENST00000302731 BDNFP23560 247 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 CHKAP35790 457 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 ARL4AP40617 200 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 OR1G1P47890 313 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 CACNA2D1P54289 1103 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 SKOR1P84550 965 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 DEUP1Q05D60 604 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 SCAPQ12770 1279 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 CBLBQ13191 982 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 NFE2Q16621 373 aaPredicted RBP11.02□□□□□ -0.65
CLP1-201ENST00000302731 SYPL2Q5VXT5 272 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 C4orf22Q6V702 233 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 BZW1Q7L1Q6 419 aaKnown RBP11.02□□□□□ -0.65
CLP1-201ENST00000302731 BHLHA9Q7RTU4 235 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 GPRIN1Q7Z2K8 1008 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 LRRTM3Q86VH5 581 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 PPIL6Q8IXY8 311 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 CRIPAKQ8N1N5 446 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 CCDC185Q8N715 623 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 OR2W6PQ8NHA6 318 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 PGM2Q96G03 612 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 CASD1Q96PB1 797 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 CSPG4P5Q96PW8 444 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 MRPL9Q9BYD2 267 aaKnown RBP11.02□□□□□ -0.65
CLP1-201ENST00000302731 ZCWPW1Q9H0M4 648 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 RNF208Q9H0X6 261 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 TMLHEQ9NVH6 421 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 GPATCH2LQ9NWQ4 482 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 CALCOCO1Q9P1Z2 691 aa11.02□□□□□ -0.65
CLP1-201ENST00000302731 FARP1Q9Y4F1 1045 aaPredicted RBP11.02□□□□□ -0.65
CLP1-201ENST00000302731 SF3B1O75533 1304 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLP1-201ENST00000302731 EIF3HO15372 352 aaKnown RBP eCLIP11.01□□□□□ -0.65
CLP1-201ENST00000302731 TADA2AO75478 443 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 ABHD2P08910 425 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 USP17L7P0C7H9 530 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 ZSCAN5DPP0CG00 497 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 RPL22P35268 128 aaKnown RBP11.01□□□□□ -0.65
CLP1-201ENST00000302731 ATXN1P54253 815 aaKnown RBP11.01□□□□□ -0.65
CLP1-201ENST00000302731 GYS2P54840 703 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 GDF10P55107 478 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 MTFR1Q15390 333 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 KRT71Q3SY84 523 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 PPP6R3Q5H9R7 873 aaPredicted RBP11.01□□□□□ -0.65
CLP1-201ENST00000302731 C6orf118Q5T5N4 469 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 DARS2Q6PI48 645 aaKnown RBP11.01□□□□□ -0.65
CLP1-201ENST00000302731 VSTM1Q6UX27 236 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 KDM7AQ6ZMT4 941 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 HFE2Q6ZVN8 426 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 CCDC25Q86WR0 208 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 FAM131BQ86XD5 332 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 SPATA2LQ8IUW3 424 aaPredicted RBP11.01□□□□□ -0.65
CLP1-201ENST00000302731 UNC45BQ8IWX7 931 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 ARFGAP2Q8N6H7 521 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 NDRG1Q92597 394 aaKnown RBP11.01□□□□□ -0.65
CLP1-201ENST00000302731 TTC25Q96NG3 672 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 KCTD15Q96SI1 283 aaPredicted RBP11.01□□□□□ -0.65
CLP1-201ENST00000302731 TMEM175Q9BSA9 504 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 COLEC11Q9BWP8 271 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 OXCT2Q9BYC2 517 aaPredicted RBP11.01□□□□□ -0.65
CLP1-201ENST00000302731 CRISPLD2Q9H0B8 497 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.01□□□□□ -0.65
CLP1-201ENST00000302731 ADAM28Q9UKQ2 775 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 LRFN2Q9ULH4 789 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 NAALADL1Q9UQQ1 740 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 PATJQ8NI35 1801 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 NLRC5Q86WI3 1866 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 TANC1Q9C0D5 1861 aa11.01□□□□□ -0.65
CLP1-201ENST00000302731 OR6C75A6NL08 312 aa11□□□□□ -0.65
CLP1-201ENST00000302731 DCDC2CA8MYV0 355 aa11□□□□□ -0.65
CLP1-201ENST00000302731 HACD1B0YJ81 288 aa11□□□□□ -0.65
CLP1-201ENST00000302731 H3BRJ5 948 aa11□□□□□ -0.65
CLP1-201ENST00000302731 H7C0C1 242 aa11□□□□□ -0.65
CLP1-201ENST00000302731 TCEA3O75764 348 aa11□□□□□ -0.65
CLP1-201ENST00000302731 ALDH2P05091 517 aa11□□□□□ -0.65
CLP1-201ENST00000302731 NCAM1P13591 858 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms