RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ZNF765Q7L2R6 523 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 KRT25Q7Z3Z0 450 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 NEK8Q86SG6 692 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 SCUBE1Q8IWY4 988 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 TRMT44Q8IYL2 757 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 SMYD4Q8IYR2 804 aaPredicted RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 SCYL3Q8IZE3 742 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 FAM9CQ8IZT9 166 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 REXO1Q8N1G1 1221 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 AOPEPQ8N6M6 819 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 FAM71DQ8N9W8 422 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 MFSD2AQ8NA29 543 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 XXYLT1Q8NBI6 393 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 FBXO15Q8NCQ5 510 aaPredicted RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 CNNM3Q8NE01 707 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 IFI44Q8TCB0 444 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 SNX29Q8TEQ0 813 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 DPF2Q92785 391 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 IRF7Q92985 503 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 PTP4A1Q93096 173 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ZKSCAN4Q969J2 545 aaPredicted RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 NCLNQ969V3 563 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ZBTB9Q96C00 473 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 SGF29Q96ES7 293 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 PAGE5Q96GU1 130 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 WNK4Q96J92 1243 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 FEM1CQ96JP0 617 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 MAELQ96JY0 434 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 AK8Q96MA6 479 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 HS6ST2Q96MM7 605 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 MED15Q96RN5 788 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 NUDCD1Q96RS6 583 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 PYM1Q9BRP8 204 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 CNPPD1Q9BV87 410 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ZNF341Q9BYN7 854 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ANO3Q9BYT9 981 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 B3GNT4Q9C0J1 378 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 SENP6Q9GZR1 1112 aaPredicted RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 INTS2Q9H0H0 1204 aaKnown RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 GLT8D2Q9H1C3 349 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 DEFB129Q9H1M3 183 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 MAGEH1Q9H213 219 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 HSD3B7Q9H2F3 369 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 BLZF1Q9H2G9 400 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 BHMT2Q9H2M3 363 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 SUV39H2Q9H5I1 410 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 TASP1Q9H6P5 420 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ERVMER34-1Q9H9K5 563 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 C6orf50Q9HD87 102 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 GPRC5DQ9NZD1 345 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 AKAP7Q9P0M2 348 aaPredicted RBP3.73□□□□□ -1.81
SMG6-208ENST00000570874 RNF181Q9P0P0 153 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 CACNG4Q9UBN1 327 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 TUBE1Q9UJT0 475 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 TMEM5Q9Y2B1 443 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 PCDHA5Q9Y5H7 936 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 PCDHA1Q9Y5I3 950 aa3.73□□□□□ -1.81
SMG6-208ENST00000570874 ZNF536O15090 1300 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 FRMPD3Q5JV73 1810 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 SLC12A8A0AV02 714 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 ARHGAP10A1A4S6 786 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 CAPN8A6NHC0 703 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 A6NHS1 94 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 ACOD1A6NK06 481 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 H7C1D1 291 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 UBE2CO00762 179 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 SULT1B1O43704 296 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 PEX11AO75192 247 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 PTP4A3O75365 173 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 TUSC2O75896 110 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 ALDH1A2O94788 518 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 POP4O95707 220 aaKnown RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 SCGB1D1O95968 90 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 AFPP02771 609 aaKnown RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 UBTFL6P0CB48 400 aaPredicted RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 RAG1P15918 1043 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 PTPN2P17706 415 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 PLCG1P19174 1290 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 TARSP26639 723 aaKnown RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 AKT1P31749 480 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 IDUAP35475 653 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 TCF7P36402 384 aaPredicted RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 LONP1P36776 959 aaKnown RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 NNMTP40261 264 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 TXKP42681 527 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 CPA2P48052 419 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 DIO1P49895 249 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 CCNHP51946 323 aaPredicted RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 KPNA1P52294 538 aaPredicted RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 HADHBP55084 474 aaKnown RBP3.72□□□□□ -1.81
SMG6-208ENST00000570874 CASP6P55212 293 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 STARD6P59095 220 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 GMFBP60983 142 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 ACTR1AP61163 376 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 ARF5P84085 180 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 CYP4F8P98187 520 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 DMPKQ09013 629 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 FOXO1Q12778 655 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 LRMPQ12912 555 aa3.72□□□□□ -1.81
SMG6-208ENST00000570874 TRAP1Q12931 704 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms