RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 MDM4O15151 490 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 COCHO43405 550 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 GBP2P32456 591 aaPredicted RBP16.01■□□□□ 0.15
NEDD1-213ENST00000557644 ZNF268Q14587 947 aaPredicted RBP16.01■□□□□ 0.15
NEDD1-213ENST00000557644 HECTD3Q5T447 861 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 BTBD8Q5XKL5 378 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 TOGARAM2Q6ZUX3 1019 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 CCDC170Q8IYT3 715 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 THAP2Q9H0W7 228 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 TASP1Q9H6P5 420 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 CDH7Q9ULB5 785 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 NAALADL1Q9UQQ1 740 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 OBSL1O75147 1896 aa16.01■□□□□ 0.15
NEDD1-213ENST00000557644 SART1O43290 800 aaKnown RBP16■□□□□ 0.15
NEDD1-213ENST00000557644 GALCP54803 685 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 YWHAZP63104 245 aaKnown RBP16■□□□□ 0.15
NEDD1-213ENST00000557644 ARHGAP15Q53QZ3 475 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 SYPL2Q5VXT5 272 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 SLC26A9Q7LBE3 791 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 ZDHHC17Q8IUH5 632 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 ARHGAP18Q8N392 663 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 METTL5Q9NRN9 209 aaKnown RBP16■□□□□ 0.15
NEDD1-213ENST00000557644 CLIC5Q9NZA1 410 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16■□□□□ 0.15
NEDD1-213ENST00000557644 STRIP2Q9ULQ0 834 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 EPN1Q9Y6I3 576 aaPredicted RBP16■□□□□ 0.15
NEDD1-213ENST00000557644 ANAPC1Q9H1A4 1944 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 TCRBV5S1A1TA0A578 114 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 NDUFA10O95299 355 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 NCAM1P13591 858 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 HDCP19113 662 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 PSEN1P49768 467 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 EFHC1Q5JVL4 640 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 TRNP1Q6NT89 227 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 EMC1Q8N766 993 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 ZSCAN18Q8TBC5 510 aaPredicted RBP16■□□□□ 0.15
NEDD1-213ENST00000557644 ZNF653Q96CK0 615 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 VCPIP1Q96JH7 1222 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 RPGRIP1Q96KN7 1286 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 PHF7Q9BWX1 381 aaPredicted RBP16■□□□□ 0.15
NEDD1-213ENST00000557644 POPDC2Q9HBU9 364 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 MYO1AQ9UBC5 1043 aa16■□□□□ 0.15
NEDD1-213ENST00000557644 DENND4AQ7Z401 1863 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 CYLC1P35663 651 aaPredicted RBP15.99■□□□□ 0.15
NEDD1-213ENST00000557644 PITX1P78337 314 aaPredicted RBP15.99■□□□□ 0.15
NEDD1-213ENST00000557644 ZXDBP98169 803 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 C10orf120Q5SQS8 335 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 RSRC2Q7L4I2 434 aaKnown RBP15.99■□□□□ 0.15
NEDD1-213ENST00000557644 CMTM8Q8IZV2 173 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 DEFB106AQ8N104 65 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 C3orf20Q8ND61 904 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 JOSD2Q8TAC2 188 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 GOLGA1Q92805 767 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 ARHGEF26Q96DR7 871 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 ABCC13Q9NSE7 274 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 CNOT8Q9UFF9 292 aaKnown RBP15.99■□□□□ 0.15
NEDD1-213ENST00000557644 TMEM59LQ9UK28 342 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 TFR2Q9UP52 801 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 CCL26Q9Y258 94 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 DOCK8Q8NF50 2099 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 C2CD4DB7Z1M9 353 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 HSF2BPO75031 334 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 PRAMEF12O95522 483 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 PTMAP06454 111 aaKnown RBP15.99■□□□□ 0.15
NEDD1-213ENST00000557644 CKMP06732 381 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 RALAP11233 206 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 LAMP2P13473 410 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 FLT3P36888 993 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 TUBP50607 506 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 GSCP56915 257 aaPredicted RBP15.99■□□□□ 0.15
NEDD1-213ENST00000557644 CCZ1BP86790 482 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 CCZ1P86791 482 aaPredicted RBP15.99■□□□□ 0.15
NEDD1-213ENST00000557644 DCAF6Q58WW2 860 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 FAM78AQ5JUQ0 283 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 PPP1R2P3Q6NXS1 205 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 DNAJC24Q6P3W2 148 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 ARID3BQ8IVW6 561 aaPredicted RBP15.99■□□□□ 0.15
NEDD1-213ENST00000557644 ZNF830Q96NB3 372 aaPredicted RBP15.99■□□□□ 0.15
NEDD1-213ENST00000557644 NACA2Q9H009 215 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 SMPD4Q9NXE4 827 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 GDE1Q9NZC3 331 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 WDR35Q9P2L0 1181 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 SFMBT1Q9UHJ3 866 aa15.99■□□□□ 0.15
NEDD1-213ENST00000557644 DENND4CQ5VZ89 1909 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 TRAV19A0A0A6YYK7 116 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 CAPN9O14815 690 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 LCA5LO95447 670 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 OLFM2O95897 454 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 KRT3P12035 628 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 RPL7AP62424 266 aaKnown RBP15.98■□□□□ 0.15
NEDD1-213ENST00000557644 EFEMP1Q12805 493 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 MAMLD1Q13495 774 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 PUS10Q3MIT2 529 aaKnown RBP15.98■□□□□ 0.15
NEDD1-213ENST00000557644 MIB1Q86YT6 1006 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 ACRBPQ8NEB7 543 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 TTC16Q8NEE8 873 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 ADAM32Q8TC27 787 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 ASB16Q96NS5 453 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 SLC2A13Q96QE2 648 aa15.98■□□□□ 0.15
NEDD1-213ENST00000557644 DESI2Q9BSY9 194 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms