RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 PIP4K2CQ8TBX8 421 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 C7orf43Q8WVR3 580 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 NDRG1Q92597 394 aaKnown RBP15.52■□□□□ 0.08
CUX1-214ENST00000550008 USP6NLQ92738 828 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 ULBP1Q9BZM6 244 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 ZWINTO95229 277 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 ODC1P11926 461 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 BDNFP23560 247 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 SPRP35270 261 aaPredicted RBP15.52■□□□□ 0.08
CUX1-214ENST00000550008 PPP1R26Q5T8A7 1209 aaPredicted RBP15.52■□□□□ 0.08
CUX1-214ENST00000550008 MTHFD1LQ6UB35 978 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 PLPPR4Q7Z2D5 763 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 ZNF516Q92618 1163 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 LRRC19Q9H756 370 aa15.52■□□□□ 0.08
CUX1-214ENST00000550008 O00370 1275 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 FAAP100Q0VG06 881 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 RABGAP1LQ5R372 815 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 PHF13Q86YI8 300 aaPredicted RBP15.52■□□□□ 0.07
CUX1-214ENST00000550008 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.52■□□□□ 0.077e-7■■■■■ 55.8
CUX1-214ENST00000550008 MYPNQ86TC9 1320 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 SPDYE5A6NIY4 337 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 AVILO75366 819 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 SPAG6O75602 509 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 SMIM10L2AP0DMW4 78 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 SMIM10L2BP0DMW5 78 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 RPL10AP62906 217 aaKnown RBP15.52■□□□□ 0.07
CUX1-214ENST00000550008 IL1RL1Q01638 556 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 EFEMP1Q12805 493 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 ANO4Q32M45 955 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 KBTBD12Q3ZCT8 623 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 PIGZQ86VD9 579 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 C1orf127Q8N9H9 656 aa15.52■□□□□ 0.07
CUX1-214ENST00000550008 SNRNP25Q9BV90 132 aaKnown RBP15.52■□□□□ 0.07
CUX1-214ENST00000550008 ZMYM2Q9UBW7 1377 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 APOC4-APOC2K7ER74 178 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 GPR182O15218 404 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 APOC2P02655 101 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 ARL2P36404 184 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 DPYSL3Q14195 570 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 CYB5D1Q6P9G0 228 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 SPATA24Q86W54 205 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 PPHLN1Q8NEY8 458 aaKnown RBP15.51■□□□□ 0.07
CUX1-214ENST00000550008 PGM2Q96G03 612 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 SENP8Q96LD8 212 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 AFF4Q9UHB7 1163 aaKnown RBP15.51■□□□□ 0.07
CUX1-214ENST00000550008 MYO9BQ13459 2157 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 SDR42E2A6NKP2 422 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 ARIH2O95376 493 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 SKIP12755 728 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 FCGRTP55899 365 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 SKOR1P84550 965 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 ZCCHC23Q6ZST2 131 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 MTDHQ86UE4 582 aaKnown RBP15.51■□□□□ 0.07
CUX1-214ENST00000550008 UNC45BQ8IWX7 931 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 ARHGEF38Q9NXL2 777 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 TUBGCP4Q9UGJ1 667 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 GRID1Q9ULK0 1009 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 MAFBQ9Y5Q3 323 aaPredicted RBP15.51■□□□□ 0.07
CUX1-214ENST00000550008 TMEM191CA6NGB0 347 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 BTBD19C9JJ37 291 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 GFAPP14136 432 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 SERPINB9P50453 376 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 SLC26A11Q86WA9 606 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 MRPL45Q9BRJ2 306 aaKnown RBP15.51■□□□□ 0.07
CUX1-214ENST00000550008 MYH6P13533 1939 aa15.51■□□□□ 0.07
CUX1-214ENST00000550008 E5RI56 91 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 SCAMP3O14828 347 aaKnown RBP15.5■□□□□ 0.07
CUX1-214ENST00000550008 FSCBQ5H9T9 825 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 IQSEC1Q6DN90 963 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 DDIASQ8IXT1 998 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 MREGQ8N565 214 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 ZFP42Q96MM3 310 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 MAGEB5Q9BZ81 275 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 WDR27A2RRH5 827 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 AIM2O14862 343 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 SPTLC1O15269 473 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 CCDC22O60826 627 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 MYL2P10916 166 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 TCN1P20061 433 aaPredicted RBP15.5■□□□□ 0.07
CUX1-214ENST00000550008 MGAT1P26572 445 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 POU6F1Q14863 301 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 OVOS1Q6IE37 1185 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 RASGEF1CQ8N431 466 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 ST6GALNAC4Q9H4F1 302 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 ERBB2P04626 1255 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 ENO3P13929 434 aaPredicted RBP15.5■□□□□ 0.07
CUX1-214ENST00000550008 ZCCHC9Q8N567 271 aaKnown RBP15.5■□□□□ 0.07
CUX1-214ENST00000550008 SPDL1Q96EA4 605 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 MAGEB18Q96M61 343 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 TXNRD2Q9NNW7 524 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 CHST12Q9NRB3 414 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 IARS2Q9NSE4 1012 aaKnown RBP15.5■□□□□ 0.07
CUX1-214ENST00000550008 HACD3Q9P035 362 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 EPS15L1Q9UBC2 864 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 STOML1Q9UBI4 398 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.5■□□□□ 0.07
CUX1-214ENST00000550008 hCG_1818297A0A087WSY0 165 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 RNF103O00237 685 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 SETSIPP0DME0 302 aa15.5■□□□□ 0.07
CUX1-214ENST00000550008 TNFRSF8P28908 595 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms