RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	LSM7	Q9UK45	103 aa	Known RBP	12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SH3BP1	Q9Y3L3	701 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	DAAM1	Q9Y4D1	1078 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	OTOGL	Q3ZCN5	2332 aa		12.94	□□□□□ -0.34
CLTCL1-205	ENST00000538828	EP300	Q09472	2414 aa	Predicted RBP	12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	GVINP1	Q7Z2Y8	2422 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828		A0A1W2PQH9	124 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	RNF225	M0QZC1	329 aa	Predicted RBP	12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CYP26A1	O43174	497 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	HOXC11	O43248	304 aa	Predicted RBP	12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	MED7	O43513	233 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	GREM1	O60565	184 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	FBXO21	O94952	628 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	TDGF1	P13385	188 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CNR2	P34972	360 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	MTIF2	P46199	727 aa	Known RBP	12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	GALK1	P51570	392 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	TKTL1	P51854	596 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	GAD2	Q05329	585 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	GAS6	Q14393	721 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	GOLGA7B	Q2TAP0	167 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	FSTL4	Q6MZW2	842 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	RHBDF2	Q6PJF5	856 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	BEND5	Q7L4P6	421 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	RRAGA	Q7L523	313 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ARHGEF19	Q8IW93	802 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	KCNV2	Q8TDN2	545 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SHC3	Q92529	594 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	TUBGCP2	Q9BSJ2	902 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	IRX2	Q9BZI1	471 aa	Predicted RBP	12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	LINC00597	Q9H2U6	94 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	NDST4	Q9H3R1	872 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	LRRC4	Q9HBW1	653 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	UBE2T	Q9NPD8	197 aa	Predicted RBP	12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ANO10	Q9NW15	660 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	OSER1	Q9NX31	292 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	MARK1	Q9P0L2	795 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	NAGPA	Q9UK23	515 aa		12.93	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SART1	O43290	800 aa	Known RBP	12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CYP17A1	P05093	508 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PON1	P27169	355 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ACADSB	P45954	432 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PGF	P49763	221 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	YWHAG	P61981	247 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	GAB4	Q2WGN9	574 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	VWA3B	Q502W6	1294 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828		Q6ZNB5	142 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	NUDT18	Q6ZVK8	323 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CAMKK1	Q8N5S9	505 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	TFAP2B	Q92481	460 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	KAT5	Q92993	513 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	TRIM62	Q9BVG3	475 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ABCC13	Q9NSE7	274 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SMPD4	Q9NXE4	827 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	STRIP2	Q9ULQ0	834 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	MYOF	Q9NZM1	2061 aa		12.92	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PRR23A	A6NEV1	266 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	LATS1	O95835	1130 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ADH5	P11766	374 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CHKA	P35790	457 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	OPRD1	P41143	372 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	GPD2	P43304	727 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	BPIFB4	P59827	614 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ZNF445	P59923	1031 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CSTF1	Q05048	431 aa	Known RBP	12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	TCP11X2	Q5H9J9	407 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	MIIP	Q5JXC2	388 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	C10orf120	Q5SQS8	335 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	CCDC183	Q5T5S1	534 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	MSANTD2	Q6P1R3	559 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SASS6	Q6UVJ0	657 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	BHLHA9	Q7RTU4	235 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ALYREF	Q86V81	257 aa	Known RBP	12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ETFBKMT	Q8IXQ9	262 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SIX6OS1	Q8N1H7	587 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ATRIP	Q8WXE1	791 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ACD	Q96AP0	544 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	PLD4	Q96BZ4	506 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ULBP1	Q9BZM6	244 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SPHK2	Q9NRA0	654 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	WDR35	Q9P2L0	1181 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	HBS1L	Q9Y450	684 aa	Known RBP	12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	NFE2L3	Q9Y4A8	694 aa		12.91	□□□□□ -0.34
CLTCL1-205	ENST00000538828	MYO18A	Q92614	2054 aa	Known RBP	12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	LRRC10B	A6NIK2	292 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	KCNJ18	B7U540	433 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828		K7ESF4	209 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828		M0QYV0	167 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	GFRA3	O60609	400 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	STC2	O76061	302 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	TBX18	O95935	607 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	LMNA	P02545	664 aa	Known RBP	12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	SLC9A1	P19634	815 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	BRD2	P25440	801 aa	Known RBP	12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	GRIA2	P42262	883 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	TNFRSF4	P43489	277 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	DAOA	P59103	153 aa		12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	MRPS21	P82921	87 aa	Known RBP	12.9	□□□□□ -0.34
CLTCL1-205	ENST00000538828	ADIG	Q0VDE8	80 aa		12.9	□□□□□ -0.34

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