RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 MGRN1O60291 552 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 RALBP11234 206 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 DPEP1P16444 411 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 ACO1P21399 889 aaKnown RBP14.26□□□□□ -0.13
SYNPO-205ENST00000522122 PTGIRP43119 386 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 HADHBP55084 474 aaKnown RBP14.26□□□□□ -0.13
SYNPO-205ENST00000522122 SLC35G1Q2M3R5 365 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 ZNF484Q5JVG2 852 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 MAP4K3Q8IVH8 894 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 OR9Q1Q8NGQ5 310 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 CYGBQ8WWM9 190 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 HSD17B14Q9BPX1 270 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 DDX50Q9BQ39 737 aaKnown RBP14.26□□□□□ -0.13
SYNPO-205ENST00000522122 IDI2Q9BXS1 227 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 LATS2Q9NRM7 1088 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 TAGLN3Q9UI15 199 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 BLOC1S6Q9UL45 172 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 AP4E1Q9UPM8 1137 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 ZNF711Q9Y462 761 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 ELK3P41970 407 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 SERPINB8P50452 374 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 SPDYAQ5MJ70 313 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 IL31Q6EBC2 164 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 GPRC5AQ8NFJ5 357 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 CERKQ8TCT0 537 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 APBB2Q92870 758 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 BTBD10Q9BSF8 475 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 TADA2AO75478 443 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 SSTR1P30872 391 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 PKN2Q16513 984 aaKnown RBP14.26□□□□□ -0.13
SYNPO-205ENST00000522122 KIZQ2M2Z5 673 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 FAM131BQ86XD5 332 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 EFHBQ8N7U6 833 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 C12orf50Q8NA57 414 aaPredicted RBP14.26□□□□□ -0.13
SYNPO-205ENST00000522122 ZNF555Q8NEP9 628 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 TCP10LQ8TDR4 215 aa14.26□□□□□ -0.13
SYNPO-205ENST00000522122 GTF3C2Q8WUA4 911 aaPredicted RBP14.26□□□□□ -0.13
SYNPO-205ENST00000522122 SUPT3HB4E1H0 165 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 H0Y626 953 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 SUPT3HO75486 399 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 TRIM16O95361 564 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 HIST1H2AGP0C0S8 130 aaPredicted RBP14.25□□□□□ -0.13
SYNPO-205ENST00000522122 ATP6V1B1P15313 513 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 HIST1H2ADP20671 130 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 BCAT1P54687 386 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 BMPR2Q13873 1038 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 KBTBD12Q3ZCT8 623 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 CCDC33Q8N5R6 958 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 KAT5Q92993 513 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 HIST1H2AHQ96KK5 128 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 HIST1H2AJQ99878 128 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 H2AFJQ9BTM1 129 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 RNPEPL1Q9HAU8 725 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 IL1RL2Q9HB29 575 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 CHCHD3Q9NX63 227 aaKnown RBP14.25□□□□□ -0.13
SYNPO-205ENST00000522122 COL14A1Q05707 1796 aaKnown RBP14.25□□□□□ -0.13
SYNPO-205ENST00000522122 LIN7AO14910 233 aaPredicted RBP14.25□□□□□ -0.13
SYNPO-205ENST00000522122 F9P00740 461 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 ATICP31939 592 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 RAP1GAPP47736 663 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 AGAP9Q5VTM2 703 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 HIC2Q96JB3 615 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 KLK14Q9P0G3 267 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 IGKV6D-41A0A0C4DH26 115 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 HSPA13P48723 471 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 KCNK10P57789 538 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 GTF2BQ00403 316 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 ELMO3Q96BJ8 720 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 CNDP1Q96KN2 507 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 IL1RAPL1Q9NZN1 696 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 DNPEPQ9ULA0 475 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 RPTORQ8N122 1335 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 ADRB2P07550 413 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 CPA3P15088 417 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 CDH2P19022 906 aaPredicted RBP14.25□□□□□ -0.13
SYNPO-205ENST00000522122 SOX11P35716 441 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 SLC26A2P50443 739 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 EFL1Q7Z2Z2 1120 aaKnown RBP14.25□□□□□ -0.13
SYNPO-205ENST00000522122 PIGWQ7Z7B1 504 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 ANKRD13AQ8IZ07 590 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 RFWD2Q8NHY2 731 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 SHC3Q92529 594 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 ZNF75CPQ92670 426 aaPredicted RBP14.25□□□□□ -0.13
SYNPO-205ENST00000522122 RIC8BQ9NVN3 520 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 CD274Q9NZQ7 290 aa14.25□□□□□ -0.13
SYNPO-205ENST00000522122 TISP43B9A030 160 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 SKAP2O75563 359 aaPredicted RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 SUPT7LO94864 414 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 SERPINB5P36952 375 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 GEMP55040 296 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 CYLC2Q14093 348 aaPredicted RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 ZNF268Q14587 947 aaPredicted RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 TRMT5Q32P41 509 aaKnown RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 FAM83AQ86UY5 434 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 C12orf56Q8IXR9 622 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 DCP1BQ8IZD4 617 aaKnown RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 ZC3H4Q9UPT8 1303 aaKnown RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 TMEM150BA6NC51 233 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 H2AFYO75367 372 aaKnown RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 ZCCHC18P0CG32 403 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms