RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TANC1Q9C0D5 1861 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 ASB14A6NK59 587 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 NDC80O14777 642 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 IFNB1P01574 187 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 MAPTP10636 758 aaKnown RBP8.9□□□□□ -0.98
HPS4-206ENST00000439453 EIF2AK2P19525 551 aaKnown RBP8.9□□□□□ -0.98
HPS4-206ENST00000439453 GRM2Q14416 872 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 MSS51Q4VC12 460 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 FNBP1LQ5T0N5 605 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 MON1BQ7L1V2 547 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 ADGRG6Q86SQ4 1221 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 RCOR2Q8IZ40 523 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 FBXL13Q8NEE6 735 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 NMD3Q96D46 503 aaKnown RBP8.9□□□□□ -0.98
HPS4-206ENST00000439453 MPP4Q96JB8 637 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 SLITRK1Q96PX8 696 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 RMDN3Q96TC7 470 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 TOPORSQ9NS56 1045 aaPredicted RBP8.9□□□□□ -0.98
HPS4-206ENST00000439453 RAB20Q9NX57 234 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 TRIP12Q14669 1992 aaPredicted RBP8.9□□□□□ -0.98
HPS4-206ENST00000439453 SMIM31A0A1B0GVY4 71 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 HNRNPRO43390 633 aaKnown RBP8.9□□□□□ -0.98
HPS4-206ENST00000439453 ATP9BO43861 1147 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 ITGA2BP08514 1039 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 POLR2MP0CAP2 368 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 VCPP55072 806 aaKnown RBP8.9□□□□□ -0.98
HPS4-206ENST00000439453 ASPHQ12797 758 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 SNRNP35Q16560 246 aaKnown RBP8.9□□□□□ -0.98
HPS4-206ENST00000439453 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.9□□□□□ -0.98
HPS4-206ENST00000439453 SFT2D3Q587I9 215 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 MFSD7Q6UXD7 560 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 SATL1Q86VE3 508 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 VSIG10LQ86VR7 867 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 FAM172AQ8WUF8 416 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 HAUS1Q96CS2 278 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 APOPT1Q96IL0 206 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 PLEKHG4BQ96PX9 1271 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 C11orf70Q9BRQ4 267 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 PCDH9Q9HC56 1237 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 S100A14Q9HCY8 104 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 VTA1Q9NP79 307 aa8.9□□□□□ -0.98
HPS4-206ENST00000439453 SGK1O00141 431 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 ZNF862O60290 1169 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 UQCRBP14927 111 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 SP2Q02086 613 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 MAMLD1Q13495 774 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 OASLQ15646 514 aaKnown RBP8.9□□□□□ -0.99
HPS4-206ENST00000439453 LRRC36Q1X8D7 754 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 HSF5Q4G112 596 aaPredicted RBP8.9□□□□□ -0.99
HPS4-206ENST00000439453 AAGABQ6PD74 315 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 KYAT3Q6YP21 454 aaKnown RBP8.9□□□□□ -0.99
HPS4-206ENST00000439453 EEPD1Q7L9B9 569 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 DHDDSQ86SQ9 333 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 PRPF39Q86UA1 669 aaKnown RBP8.9□□□□□ -0.99
HPS4-206ENST00000439453 SERAC1Q96JX3 654 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 CNTN3Q9P232 1028 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 HSFX1Q9UBD0 423 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 TELO2Q9Y4R8 837 aa8.9□□□□□ -0.99
HPS4-206ENST00000439453 OR6B1O95007 311 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 KRT1P04264 644 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 AKR1A1P14550 325 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 DEUP1Q05D60 604 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 SH2D4BQ5SQS7 431 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 ANKRD22Q5VYY1 191 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 HAUS6Q7Z4H7 955 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 RHPN2Q8IUC4 686 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 PALM2Q8IXS6 379 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 FBXO36Q8NEA4 188 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 MIPOL1Q8TD10 442 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 NSUN6Q8TEA1 469 aaKnown RBP8.89□□□□□ -0.99
HPS4-206ENST00000439453 WDR83Q9BRX9 315 aaKnown RBP8.89□□□□□ -0.99
HPS4-206ENST00000439453 TMEM121Q9BTD3 319 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 PI4K2AQ9BTU6 479 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 WDR11Q9BZH6 1224 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 CLIC5Q9NZA1 410 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 NDUFA13Q9P0J0 144 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 FARP1Q9Y4F1 1045 aaPredicted RBP8.89□□□□□ -0.99
HPS4-206ENST00000439453 GMEB1Q9Y692 573 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 LOXHD1Q8IVV2 1947 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 TMCC1O94876 653 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 NR3C2P08235 984 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 MCCD1P59942 119 aaPredicted RBP8.89□□□□□ -0.99
HPS4-206ENST00000439453 PLCB3Q01970 1234 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 MSLNQ13421 630 aaPredicted RBP8.89□□□□□ -0.99
HPS4-206ENST00000439453 PCGF5Q86SE9 256 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 ZNF677Q86XU0 584 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 COPS5Q92905 334 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 EPB41L1Q9H4G0 881 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 MRPL47Q9HD33 250 aaKnown RBP8.89□□□□□ -0.99
HPS4-206ENST00000439453 ARID2Q68CP9 1835 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 SZT2Q5T011 3432 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 IQANK1A0A1B0GTG1 560 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 I3L4J1 428 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 KLF11O14901 512 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 TLR3O15455 904 aaKnown RBP8.89□□□□□ -0.99
HPS4-206ENST00000439453 COQ9O75208 318 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 ITGAVP06756 1048 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 TCF4P15884 667 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 VCLP18206 1134 aa8.89□□□□□ -0.99
HPS4-206ENST00000439453 CST5P28325 142 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms