RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W YKL065W-AQ2V2P2 73 aa1.99□□□□□ -2.09
SSO1YPL232W YAL067W-AQ8TGK6 75 aa1.99□□□□□ -2.09
SSO1YPL232W AIM4P38305 123 aaPredicted RBP1.98□□□□□ -2.09
SSO1YPL232W YNL198CP40166 100 aa1.98□□□□□ -2.09
SSO1YPL232W YGR039WP53225 103 aa1.98□□□□□ -2.09
SSO1YPL232W OLI1P61829 76 aa1.98□□□□□ -2.09
SSO1YPL232W YPR170W-BP0C5R9 85 aa1.97□□□□□ -2.09
SSO1YPL232W GLC8P41818 229 aa1.97□□□□□ -2.09
SSO1YPL232W YFR032C-BQ8TGU2 87 aa1.97□□□□□ -2.09
SSO1YPL232W YIL102CP40488 101 aa1.94□□□□□ -2.1
SSO1YPL232W YOL013W-AP0C272 63 aaPredicted RBP1.92□□□□□ -2.1
SSO1YPL232W YHR125WP38831 101 aa1.91□□□□□ -2.1
SSO1YPL232W YLR412C-AQ3E742 68 aa1.91□□□□□ -2.1
SSO1YPL232W YML100W-AQ8TGT0 57 aa1.91□□□□□ -2.1
SSO1YPL232W YCR085WP25650 117 aa1.89□□□□□ -2.11
SSO1YPL232W SLO1Q3E784 85 aa1.88□□□□□ -2.11
SSO1YPL232W YHR032W-AP0C5N6 59 aa1.86□□□□□ -2.11
SSO1YPL232W LSM8P47093 109 aaKnown RBP1.86□□□□□ -2.11
SSO1YPL232W YLR285C-AQ3E771 56 aa1.86□□□□□ -2.11
SSO1YPL232W EMC6Q12431 108 aa1.85□□□□□ -2.11
SSO1YPL232W SBH1P52870 82 aa1.84□□□□□ -2.11
SSO1YPL232W MRX7P53869 86 aa1.83□□□□□ -2.12
SSO1YPL232W YFL041W-AQ3E817 63 aa1.83□□□□□ -2.12
SSO1YPL232W YIR021W-AQ3E739 70 aa1.82□□□□□ -2.12
SSO1YPL232W YNL277W-AQ3E7Z0 62 aa1.82□□□□□ -2.12
SSO1YPL232W YSY6P38374 65 aa1.81□□□□□ -2.12
SSO1YPL232W RUB1Q03919 77 aa1.8□□□□□ -2.12
SSO1YPL232W YOR381W-AQ3E804 55 aa1.77□□□□□ -2.13
SSO1YPL232W YOR394C-AQ8TGJ0 55 aa1.77□□□□□ -2.13
SSO1YPL232W YOR314WQ12506 109 aa1.76□□□□□ -2.13
SSO1YPL232W YBR201C-AQ2V2Q3 67 aa1.76□□□□□ -2.13
SSO1YPL232W INO4P13902 151 aa1.72□□□□□ -2.13
SSO1YPL232W NOP10Q6Q547 58 aaPredicted RBP1.72□□□□□ -2.13
SSO1YPL232W SOM1Q05676 74 aa1.68□□□□□ -2.14
SSO1YPL232W OST5Q92316 86 aa1.68□□□□□ -2.14
SSO1YPL232W YOR376W-AQ3E805 51 aa1.67□□□□□ -2.14
SSO1YPL232W QCR10P37299 77 aa1.66□□□□□ -2.14
SSO1YPL232W ATX1P38636 73 aa1.66□□□□□ -2.14
SSO1YPL232W YOL166W-AQ8TGJ1 51 aa1.65□□□□□ -2.15
SSO1YPL232W YEL014CP39999 101 aa1.62□□□□□ -2.15
SSO1YPL232W ATP17Q06405 101 aa1.61□□□□□ -2.15
SSO1YPL232W SDH6Q3E785 79 aa1.61□□□□□ -2.15
SSO1YPL232W YDR246W-AQ3E763 66 aa1.58□□□□□ -2.16
SSO1YPL232W YER188C-AP0C0V2 99 aa1.57□□□□□ -2.16
SSO1YPL232W YDR182W-AQ3E796 67 aa1.56□□□□□ -2.16
SSO1YPL232W YOR072W-BQ3E832 53 aa1.56□□□□□ -2.16
SSO1YPL232W YFL065CP43539 102 aa1.55□□□□□ -2.16
SSO1YPL232W YPR203WQ08994 102 aa1.55□□□□□ -2.16
SSO1YPL232W YHR086W-AQ3E746 53 aa1.55□□□□□ -2.16
SSO1YPL232W HUB1Q6Q546 73 aa1.54□□□□□ -2.16
SSO1YPL232W YGL014C-AP0C5N1 53 aa1.52□□□□□ -2.17
SSO1YPL232W YMR122CQ03879 124 aa1.52□□□□□ -2.17
SSO1YPL232W YMR001C-AQ8TGS9 76 aa1.52□□□□□ -2.17
SSO1YPL232W YCR108CQ3E819 63 aa1.45□□□□□ -2.18
SSO1YPL232W YPL038W-AQ3E7B4 63 aa1.44□□□□□ -2.18
SSO1YPL232W YDR119W-AQ2V2P9 66 aa1.41□□□□□ -2.18
SSO1YPL232W YCR095W-AQ3E787 52 aa1.39□□□□□ -2.19
SSO1YPL232W YHR050W-AQ05451 56 aa1.33□□□□□ -2.2
SSO1YPL232W TOM6P33448 61 aa1.29□□□□□ -2.2
SSO1YPL232W HHY1P39982 102 aa1.26□□□□□ -2.21
SSO1YPL232W YBR072C-AQ3E794 53 aa1.16□□□□□ -2.22
SSO1YPL232W YLR157W-EP0CF00 54 aa1.08□□□□□ -2.24
SSO1YPL232W YOL164W-AQ3E7A5 60 aa1.03□□□□□ -2.24
Retrieved 63 of 5,963 RNA–protein pairs in 9.8 ms