RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C YOL097W-AQ3E7Y9 61 aa4□□□□□ -1.77
UME1YPL139C YLR157W-DP0CE99 70 aa3.99□□□□□ -1.77
UME1YPL139C EDC1P53080 175 aaPredicted RBP3.99□□□□□ -1.77
UME1YPL139C YDR381C-AQ3E6R5 114 aa3.98□□□□□ -1.77
UME1YPL139C YFL041W-AQ3E817 63 aa3.95□□□□□ -1.78
UME1YPL139C COX7P10174 60 aa3.94□□□□□ -1.78
UME1YPL139C COX23P38824 151 aa3.93□□□□□ -1.78
UME1YPL139C YPL038W-AQ3E7B4 63 aa3.92□□□□□ -1.78
UME1YPL139C RPL36AP05745 100 aaPredicted RBP3.91□□□□□ -1.78
UME1YPL139C COX8P04039 78 aa3.9□□□□□ -1.78
UME1YPL139C YDL012CQ12489 107 aa3.89□□□□□ -1.79
UME1YPL139C YEL014CP39999 101 aa3.88□□□□□ -1.79
UME1YPL139C RPL38P49167 78 aaKnown RBP3.87□□□□□ -1.79
UME1YPL139C YHR073W-AP0C5N7 58 aa3.82□□□□□ -1.8
UME1YPL139C YOR314WQ12506 109 aa3.81□□□□□ -1.8
UME1YPL139C YCR095W-AQ3E787 52 aa3.81□□□□□ -1.8
UME1YPL139C YAR064WP39563 99 aa3.78□□□□□ -1.8
UME1YPL139C YJR128WP47162 119 aa3.78□□□□□ -1.8
UME1YPL139C YER188C-AP0C0V2 99 aa3.77□□□□□ -1.81
UME1YPL139C YLR285C-AQ3E771 56 aa3.77□□□□□ -1.81
UME1YPL139C YOR316C-AQ3E806 69 aa3.76□□□□□ -1.81
UME1YPL139C YJL144WP47009 104 aa3.75□□□□□ -1.81
UME1YPL139C YKL065W-AQ2V2P2 73 aa3.75□□□□□ -1.81
UME1YPL139C MRX7P53869 86 aa3.73□□□□□ -1.81
UME1YPL139C YGL014C-AP0C5N1 53 aa3.72□□□□□ -1.81
UME1YPL139C AIM4P38305 123 aaPredicted RBP3.7□□□□□ -1.82
UME1YPL139C YMR122CQ03879 124 aa3.7□□□□□ -1.82
UME1YPL139C YJL009WP47078 108 aa3.69□□□□□ -1.82
UME1YPL139C YDR246W-AQ3E763 66 aa3.68□□□□□ -1.82
UME1YPL139C Q0017Q9ZZX8 53 aa3.68□□□□□ -1.82
UME1YPL139C YSY6P38374 65 aa3.67□□□□□ -1.82
UME1YPL139C YDR210WQ03482 75 aa3.65□□□□□ -1.82
UME1YPL139C YIL156W-BQ2V2P4 73 aa3.64□□□□□ -1.83
UME1YPL139C NOP10Q6Q547 58 aaPredicted RBP3.62□□□□□ -1.83
UME1YPL139C YBR016WP38216 128 aa3.55□□□□□ -1.84
UME1YPL139C YOL013W-AP0C272 63 aaPredicted RBP3.54□□□□□ -1.84
UME1YPL139C YLR255CO13574 117 aa3.52□□□□□ -1.85
UME1YPL139C YIL102CP40488 101 aa3.51□□□□□ -1.85
UME1YPL139C YGR146C-AQ8TGT9 53 aa3.5□□□□□ -1.85
UME1YPL139C YDR182W-AQ3E796 67 aa3.49□□□□□ -1.85
UME1YPL139C RPS30AP0CX33 63 aaKnown RBP3.44□□□□□ -1.86
UME1YPL139C RPS30BP0CX34 63 aaKnown RBP3.44□□□□□ -1.86
UME1YPL139C ATP17Q06405 101 aa3.41□□□□□ -1.86
UME1YPL139C YOL166W-AQ8TGJ1 51 aa3.4□□□□□ -1.86
UME1YPL139C OLI1P61829 76 aa3.37□□□□□ -1.87
UME1YPL139C YBL044WP38194 122 aa3.36□□□□□ -1.87
UME1YPL139C YBR201C-AQ2V2Q3 67 aa3.36□□□□□ -1.87
UME1YPL139C HUB1Q6Q546 73 aa3.35□□□□□ -1.87
UME1YPL139C YML054C-AQ3E809 52 aa3.29□□□□□ -1.88
UME1YPL139C YHR086W-AQ3E746 53 aa3.27□□□□□ -1.89
UME1YPL139C SDH6Q3E785 79 aa3.26□□□□□ -1.89
UME1YPL139C RPS29BP41058 56 aaKnown RBP3.23□□□□□ -1.89
UME1YPL139C RPL37AP49166 88 aaKnown RBP3.21□□□□□ -1.9
UME1YPL139C RPS29AP41057 56 aaKnown RBP3.2□□□□□ -1.9
UME1YPL139C YMR001C-AQ8TGS9 76 aa3.19□□□□□ -1.9
UME1YPL139C YOR394C-AQ8TGJ0 55 aa3.08□□□□□ -1.92
UME1YPL139C HHY1P39982 102 aa3□□□□□ -1.93
UME1YPL139C YBR072C-AQ3E794 53 aa2.95□□□□□ -1.94
UME1YPL139C YCR108CQ3E819 63 aa2.87□□□□□ -1.95
UME1YPL139C YOR072W-BQ3E832 53 aa2.67□□□□□ -1.98
UME1YPL139C YOL164W-AQ3E7A5 60 aa2.62□□□□□ -1.99
UME1YPL139C YLR157W-EP0CF00 54 aa2.58□□□□□ -2
UME1YPL139C YHR050W-AQ05451 56 aa2.23□□□□□ -2.05
Retrieved 63 of 5,963 RNA–protein pairs in 14 ms