RNA–Protein interactions for RNA: YPL116W

HOS3, Transcript of Trichostatin A-insensitive homodimeric histone deacetylase (HDAC), yeastyeast

Gene HOS3, Length 2,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HOS3YPL116W YLR307C-AQ3E825 87 aa2.57□□□□□ -2
HOS3YPL116W YHR007C-AQ07074 71 aa2.56□□□□□ -2
HOS3YPL116W YJR128WP47162 119 aa2.55□□□□□ -2
HOS3YPL116W YOR394C-AQ8TGJ0 55 aa2.55□□□□□ -2
HOS3YPL116W COX7P10174 60 aa2.54□□□□□ -2
HOS3YPL116W YBR230W-AQ3E762 66 aa2.54□□□□□ -2
HOS3YPL116W TEL1P38110 2787 aa2.54□□□□□ -2
HOS3YPL116W YJL127C-BQ3E828 52 aa2.54□□□□□ -2
HOS3YPL116W RPL43AP0CX25 92 aaKnown RBP2.53□□□□□ -2
HOS3YPL116W RPL43BP0CX26 92 aa2.53□□□□□ -2
HOS3YPL116W DDR2P89113 61 aa2.53□□□□□ -2
HOS3YPL116W RPS27AP35997 82 aaKnown RBP2.53□□□□□ -2.01
HOS3YPL116W RPS27BP38711 82 aa2.53□□□□□ -2.01
HOS3YPL116W GIS2P53849 153 aaKnown RBP RIP-Chip data2.53□□□□□ -2.01not detected
HOS3YPL116W PMP3P87284 55 aa2.51□□□□□ -2.01
HOS3YPL116W LCL1Q02786 101 aa2.51□□□□□ -2.01
HOS3YPL116W YMR105W-AQ8TGS8 64 aa2.48□□□□□ -2.01
HOS3YPL116W FMP27Q06179 2628 aa2.47□□□□□ -2.01
HOS3YPL116W YCR108CQ3E819 63 aa2.46□□□□□ -2.02
HOS3YPL116W YNL146C-AQ3E7Z1 64 aa2.45□□□□□ -2.02
HOS3YPL116W YGR146C-AQ8TGT9 53 aa2.45□□□□□ -2.02
HOS3YPL116W RDS3Q06835 107 aaPredicted RBP2.44□□□□□ -2.02
HOS3YPL116W YJL009WP47078 108 aa2.43□□□□□ -2.02
HOS3YPL116W OLI1P61829 76 aa2.43□□□□□ -2.02
HOS3YPL116W RPL37BP51402 88 aaKnown RBP2.42□□□□□ -2.02
HOS3YPL116W GCN1P33892 2672 aaKnown RBP2.41□□□□□ -2.02
HOS3YPL116W RPL39P04650 51 aa2.41□□□□□ -2.02
HOS3YPL116W YBL044WP38194 122 aa2.41□□□□□ -2.02
HOS3YPL116W HOR7Q05827 59 aa2.4□□□□□ -2.02
HOS3YPL116W RPC10P40422 70 aa2.39□□□□□ -2.03
HOS3YPL116W PRP8P33334 2413 aaKnown RBP2.37□□□□□ -2.03
HOS3YPL116W YBR016WP38216 128 aa2.36□□□□□ -2.03
HOS3YPL116W YMR230W-AQ3E7B5 62 aa2.35□□□□□ -2.03
HOS3YPL116W YIL046W-AQ3E7Z4 54 aa2.35□□□□□ -2.03
HOS3YPL116W HFA1P32874 2273 aa2.33□□□□□ -2.04
HOS3YPL116W UTP20P35194 2493 aaKnown RBP2.32□□□□□ -2.04
HOS3YPL116W YOR316C-AQ3E806 69 aa2.32□□□□□ -2.04
HOS3YPL116W MEC1P38111 2368 aa2.31□□□□□ -2.04
HOS3YPL116W IRA2P19158 3079 aa2.3□□□□□ -2.04
HOS3YPL116W YHR073W-AP0C5N7 58 aa2.29□□□□□ -2.04
HOS3YPL116W YBR056W-AI2HB52 66 aa2.28□□□□□ -2.04
HOS3YPL116W YBR072C-AQ3E794 53 aa2.27□□□□□ -2.05
HOS3YPL116W IRA1P18963 3092 aa2.25□□□□□ -2.05
HOS3YPL116W HHY1P39982 102 aa2.23□□□□□ -2.05
HOS3YPL116W YHR212W-AP0CX91 67 aa2.21□□□□□ -2.06
HOS3YPL116W RPL37AP49166 88 aaKnown RBP2.18□□□□□ -2.06
HOS3YPL116W CSF1Q12150 2958 aa2.18□□□□□ -2.06
HOS3YPL116W YHR086W-AQ3E746 53 aa2.17□□□□□ -2.06
HOS3YPL116W YGL260WP53056 76 aa2.15□□□□□ -2.07
HOS3YPL116W YLL066W-BQ8TGJ7 56 aa2.15□□□□□ -2.07
HOS3YPL116W YDR034C-AP0C289 58 aa2.14□□□□□ -2.07
HOS3YPL116W YOR072W-BQ3E832 53 aa2.13□□□□□ -2.07
HOS3YPL116W TRA1P38811 3744 aa2.12□□□□□ -2.07
HOS3YPL116W YOL164W-AQ3E7A5 60 aa2.05□□□□□ -2.08
HOS3YPL116W DYN1P36022 4092 aa2.01□□□□□ -2.09
HOS3YPL116W Q0297Q9ZZV8 51 aa1.98□□□□□ -2.09
HOS3YPL116W MDN1Q12019 4910 aaKnown RBP1.96□□□□□ -2.1
HOS3YPL116W YLR157W-EP0CF00 54 aa1.87□□□□□ -2.11
HOS3YPL116W YML054C-AQ3E809 52 aa1.78□□□□□ -2.12
HOS3YPL116W Q0017Q9ZZX8 53 aa1.7□□□□□ -2.14
HOS3YPL116W YHR050W-AQ05451 56 aa1.62□□□□□ -2.15
HOS3YPL116W RPS29AP41057 56 aaKnown RBP1.61□□□□□ -2.15
HOS3YPL116W RPS29BP41058 56 aaKnown RBP1.56□□□□□ -2.16
Retrieved 63 of 5,963 RNA–protein pairs in 10.2 ms