RNA–Protein interactions for RNA: YPL042C

SSN3, Transcript of Cyclin-dependent protein kinase, yeastyeast

Gene SSN3, Length 1,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN3YPL042C YDR210WQ03482 75 aa6.33□□□□□ -1.4
SSN3YPL042C RPL29P05747 59 aaPredicted RBP6.32□□□□□ -1.4
SSN3YPL042C YBL039W-BP0C268 59 aa6.3□□□□□ -1.4
SSN3YPL042C YDR034C-AP0C289 58 aa6.26□□□□□ -1.41
SSN3YPL042C ATP17Q06405 101 aa6.26□□□□□ -1.41
SSN3YPL042C YGL014C-AP0C5N1 53 aa6.25□□□□□ -1.41
SSN3YPL042C YGL041C-BQ3E750 60 aa6.24□□□□□ -1.41
SSN3YPL042C YNL162W-AQ3E7A8 72 aa6.24□□□□□ -1.41
SSN3YPL042C HUB1Q6Q546 73 aa6.24□□□□□ -1.41
SSN3YPL042C Q0032Q9ZZX7 96 aa6.23□□□□□ -1.41
SSN3YPL042C LCL2Q08045 131 aa6.23□□□□□ -1.41
SSN3YPL042C MDN1Q12019 4910 aaKnown RBP6.21□□□□□ -1.42
SSN3YPL042C YLR307C-AQ3E825 87 aa6.2□□□□□ -1.42
SSN3YPL042C YBR230W-AQ3E762 66 aa6.14□□□□□ -1.43
SSN3YPL042C YNL122CP53921 115 aaPredicted RBP6.13□□□□□ -1.43
SSN3YPL042C YJL127C-BQ3E828 52 aa6.13□□□□□ -1.43
SSN3YPL042C YJR107C-AP0CT86 78 aa6.08□□□□□ -1.44
SSN3YPL042C YJL144WP47009 104 aa6.08□□□□□ -1.44
SSN3YPL042C LCL1Q02786 101 aa6.06□□□□□ -1.44
SSN3YPL042C DDR2P89113 61 aa6.05□□□□□ -1.44
SSN3YPL042C YMR001C-AQ8TGS9 76 aa6.04□□□□□ -1.44
SSN3YPL042C RPL38P49167 78 aaKnown RBP6.03□□□□□ -1.44
SSN3YPL042C YLR157W-DP0CE99 70 aa6.02□□□□□ -1.45
SSN3YPL042C GIS2P53849 153 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
SSN3YPL042C ATP18P81450 59 aa6.01□□□□□ -1.45
SSN3YPL042C YLR255CO13574 117 aa6□□□□□ -1.45
SSN3YPL042C SDH6Q3E785 79 aa5.99□□□□□ -1.45
SSN3YPL042C YIL102CP40488 101 aa5.98□□□□□ -1.45
SSN3YPL042C YFR009W-AP0C5M9 85 aa5.98□□□□□ -1.45
SSN3YPL042C YHR007C-AQ07074 71 aa5.98□□□□□ -1.45
SSN3YPL042C YBR201C-AQ2V2Q3 67 aa5.97□□□□□ -1.45
SSN3YPL042C YOR072WQ08486 104 aa5.96□□□□□ -1.46
SSN3YPL042C YOL097W-AQ3E7Y9 61 aa5.89□□□□□ -1.47
SSN3YPL042C YHR213W-BQ8TGK1 99 aa5.88□□□□□ -1.47
SSN3YPL042C YMR230W-AQ3E7B5 62 aa5.88□□□□□ -1.47
SSN3YPL042C YDL012CQ12489 107 aa5.86□□□□□ -1.47
SSN3YPL042C YOL013W-AP0C272 63 aaPredicted RBP5.85□□□□□ -1.47
SSN3YPL042C YJL133C-AQ3E7A3 74 aa5.85□□□□□ -1.47
SSN3YPL042C COX7P10174 60 aa5.66□□□□□ -1.5
SSN3YPL042C YJL009WP47078 108 aa5.6□□□□□ -1.51
SSN3YPL042C YJR128WP47162 119 aa5.6□□□□□ -1.51
SSN3YPL042C YAR064WP39563 99 aa5.59□□□□□ -1.51
SSN3YPL042C YOR394C-AQ8TGJ0 55 aa5.54□□□□□ -1.52
SSN3YPL042C YHR073W-AP0C5N7 58 aa5.48□□□□□ -1.53
SSN3YPL042C YOR316C-AQ3E806 69 aa5.36□□□□□ -1.55
SSN3YPL042C OLI1P61829 76 aa5.31□□□□□ -1.56
SSN3YPL042C YGR146C-AQ8TGT9 53 aa5.24□□□□□ -1.57
SSN3YPL042C YCR108CQ3E819 63 aa5.22□□□□□ -1.57
SSN3YPL042C RPL37BP51402 88 aaKnown RBP5.18□□□□□ -1.58
SSN3YPL042C YHR086W-AQ3E746 53 aa5.17□□□□□ -1.58
SSN3YPL042C YBR016WP38216 128 aa5.15□□□□□ -1.59
SSN3YPL042C YBL044WP38194 122 aa5.13□□□□□ -1.59
SSN3YPL042C YBR072C-AQ3E794 53 aa5.08□□□□□ -1.6
SSN3YPL042C HHY1P39982 102 aa5.06□□□□□ -1.6
SSN3YPL042C Q0017Q9ZZX8 53 aa5.02□□□□□ -1.61
SSN3YPL042C YML054C-AQ3E809 52 aa4.76□□□□□ -1.65
SSN3YPL042C RPL37AP49166 88 aaKnown RBP4.57□□□□□ -1.68
SSN3YPL042C YOL164W-AQ3E7A5 60 aa4.53□□□□□ -1.68
SSN3YPL042C YOR072W-BQ3E832 53 aa4.49□□□□□ -1.69
SSN3YPL042C YLR157W-EP0CF00 54 aa4.31□□□□□ -1.72
SSN3YPL042C RPS29BP41058 56 aaKnown RBP4.1□□□□□ -1.75
SSN3YPL042C RPS29AP41057 56 aaKnown RBP3.96□□□□□ -1.78
SSN3YPL042C YHR050W-AQ05451 56 aa3.5□□□□□ -1.85
Retrieved 63 of 5,963 RNA–protein pairs in 4.8 ms