RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W RPS28AQ3E7X9 67 aaPredicted RBP4.91□□□□□ -1.62
AMF1YOR378W YGR164WP53291 111 aa4.9□□□□□ -1.63
AMF1YOR378W HHF1P02309 103 aaKnown RBP4.89□□□□□ -1.63
AMF1YOR378W YOL166W-AQ8TGJ1 51 aa4.89□□□□□ -1.63
AMF1YOR378W YBR121C-AP0C5L4 52 aa4.88□□□□□ -1.63
AMF1YOR378W YDR182W-AQ3E796 67 aa4.88□□□□□ -1.63
AMF1YOR378W YJR128WP47162 119 aa4.86□□□□□ -1.63
AMF1YOR378W YLR412C-AQ3E742 68 aa4.84□□□□□ -1.63
AMF1YOR378W RPL37BP51402 88 aaKnown RBP4.82□□□□□ -1.64
AMF1YOR378W YHR125WP38831 101 aa4.8□□□□□ -1.64
AMF1YOR378W YGR146C-AQ8TGT9 53 aa4.78□□□□□ -1.64
AMF1YOR378W YJL144WP47009 104 aa4.77□□□□□ -1.65
AMF1YOR378W RPS30AP0CX33 63 aaKnown RBP4.77□□□□□ -1.65
AMF1YOR378W RPS30BP0CX34 63 aaKnown RBP4.77□□□□□ -1.65
AMF1YOR378W YLR255CO13574 117 aa4.76□□□□□ -1.65
AMF1YOR378W COX8P04039 78 aa4.76□□□□□ -1.65
AMF1YOR378W YKL065W-AQ2V2P2 73 aa4.75□□□□□ -1.65
AMF1YOR378W YOR381W-AQ3E804 55 aa4.72□□□□□ -1.65
AMF1YOR378W YBR016WP38216 128 aa4.7□□□□□ -1.66
AMF1YOR378W YBL008W-AQ3E821 79 aa4.7□□□□□ -1.66
AMF1YOR378W YFR032C-BQ8TGU2 87 aa4.7□□□□□ -1.66
AMF1YOR378W YMR122CQ03879 124 aa4.69□□□□□ -1.66
AMF1YOR378W SDH6Q3E785 79 aa4.69□□□□□ -1.66
AMF1YOR378W Q0017Q9ZZX8 53 aa4.69□□□□□ -1.66
AMF1YOR378W FYV12Q08559 129 aa4.67□□□□□ -1.66
AMF1YOR378W YNL277W-AQ3E7Z0 62 aa4.67□□□□□ -1.66
AMF1YOR378W OLI1P61829 76 aa4.65□□□□□ -1.67
AMF1YOR378W YER188C-AP0C0V2 99 aa4.64□□□□□ -1.67
AMF1YOR378W YIL156W-BQ2V2P4 73 aa4.64□□□□□ -1.67
AMF1YOR378W OST5Q92316 86 aa4.62□□□□□ -1.67
AMF1YOR378W YMR001C-AQ8TGS9 76 aa4.6□□□□□ -1.67
AMF1YOR378W YBR201C-AQ2V2Q3 67 aa4.59□□□□□ -1.67
AMF1YOR378W YGL034CP53186 121 aa4.58□□□□□ -1.68
AMF1YOR378W YJL009WP47078 108 aa4.56□□□□□ -1.68
AMF1YOR378W MRX7P53869 86 aa4.56□□□□□ -1.68
AMF1YOR378W HUB1Q6Q546 73 aa4.55□□□□□ -1.68
AMF1YOR378W YCR095W-AQ3E787 52 aa4.48□□□□□ -1.69
AMF1YOR378W YDR210WQ03482 75 aa4.45□□□□□ -1.7
AMF1YOR378W YOR376W-AQ3E805 51 aa4.41□□□□□ -1.7
AMF1YOR378W YML054C-AQ3E809 52 aa4.41□□□□□ -1.7
AMF1YOR378W YML100W-AQ8TGT0 57 aa4.4□□□□□ -1.71
AMF1YOR378W YBL044WP38194 122 aa4.38□□□□□ -1.71
AMF1YOR378W ATP17Q06405 101 aa4.38□□□□□ -1.71
AMF1YOR378W YOR394C-AQ8TGJ0 55 aa4.28□□□□□ -1.72
AMF1YOR378W YGL014C-AP0C5N1 53 aa4.12□□□□□ -1.75
AMF1YOR378W QCR10P37299 77 aa4.11□□□□□ -1.75
AMF1YOR378W YCR108CQ3E819 63 aa4.1□□□□□ -1.75
AMF1YOR378W YEL014CP39999 101 aa4.08□□□□□ -1.76
AMF1YOR378W RPL37AP49166 88 aaKnown RBP4.08□□□□□ -1.76
AMF1YOR378W SOM1Q05676 74 aa3.95□□□□□ -1.78
AMF1YOR378W YOR072W-BQ3E832 53 aa3.91□□□□□ -1.78
AMF1YOR378W RPS29BP41058 56 aaKnown RBP3.87□□□□□ -1.79
AMF1YOR378W YER175W-AQ8TGU4 54 aa3.83□□□□□ -1.8
AMF1YOR378W RPS29AP41057 56 aaKnown RBP3.75□□□□□ -1.81
AMF1YOR378W HHY1P39982 102 aa3.7□□□□□ -1.82
AMF1YOR378W YBR072C-AQ3E794 53 aa3.6□□□□□ -1.83
AMF1YOR378W YER078W-AQ3E7A2 54 aa3.58□□□□□ -1.84
AMF1YOR378W YHR032W-AP0C5N6 59 aa3.42□□□□□ -1.86
AMF1YOR378W YAL067W-AQ8TGK6 75 aa3.29□□□□□ -1.88
AMF1YOR378W YHR050W-AQ05451 56 aa3.22□□□□□ -1.89
AMF1YOR378W YOL164W-AQ3E7A5 60 aa2.93□□□□□ -1.94
AMF1YOR378W YHR086W-AQ3E746 53 aa2.61□□□□□ -1.99
AMF1YOR378W YLR157W-EP0CF00 54 aa2.58□□□□□ -2
Retrieved 63 of 5,963 RNA–protein pairs in 5.5 ms