RNA–Protein interactions for RNA: YOR132W

VPS17, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS17, Length 1,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS17YOR132W YGL014C-AP0C5N1 53 aa2.02□□□□□ -2.09
VPS17YOR132W AIM4P38305 123 aaPredicted RBP2.02□□□□□ -2.09
VPS17YOR132W BSC4P53841 131 aa2.02□□□□□ -2.09
VPS17YOR132W YBR027CP38220 110 aa2.01□□□□□ -2.09
VPS17YOR132W DDR2P89113 61 aa2.01□□□□□ -2.09
VPS17YOR132W YOL166W-AQ8TGJ1 51 aa2.01□□□□□ -2.09
VPS17YOR132W YLR162WQ06235 118 aa2□□□□□ -2.09
VPS17YOR132W YOR072WQ08486 104 aa2□□□□□ -2.09
VPS17YOR132W YOR314WQ12506 109 aa2□□□□□ -2.09
VPS17YOR132W YHR086W-AQ3E746 53 aa2□□□□□ -2.09
VPS17YOR132W YGL041C-BQ3E750 60 aa2□□□□□ -2.09
VPS17YOR132W YDR182W-AQ3E796 67 aa1.98□□□□□ -2.09
VPS17YOR132W YDR034C-AP0C289 58 aa1.97□□□□□ -2.09
VPS17YOR132W YMR122CQ03879 124 aa1.97□□□□□ -2.09
VPS17YOR132W YOL013W-AP0C272 63 aaPredicted RBP1.96□□□□□ -2.1
VPS17YOR132W YHL005CP38752 130 aa1.96□□□□□ -2.1
VPS17YOR132W YIL102CP40488 101 aa1.96□□□□□ -2.1
VPS17YOR132W RPS30AP0CX33 63 aaKnown RBP1.95□□□□□ -2.1
VPS17YOR132W RPS30BP0CX34 63 aaKnown RBP1.95□□□□□ -2.1
VPS17YOR132W YGR121W-AQ3E816 71 aa1.95□□□□□ -2.1
VPS17YOR132W YAR064WP39563 99 aa1.94□□□□□ -2.1
VPS17YOR132W LCL2Q08045 131 aa1.92□□□□□ -2.1
VPS17YOR132W YDR010CQ12426 110 aa1.9□□□□□ -2.1
VPS17YOR132W YOL097W-AQ3E7Y9 61 aa1.9□□□□□ -2.1
VPS17YOR132W YLR157W-DP0CE99 70 aa1.89□□□□□ -2.11
VPS17YOR132W YCR095W-AQ3E787 52 aa1.89□□□□□ -2.11
VPS17YOR132W LCL1Q02786 101 aa1.88□□□□□ -2.11
VPS17YOR132W YJR128WP47162 119 aa1.87□□□□□ -2.11
VPS17YOR132W SDH6Q3E785 79 aa1.87□□□□□ -2.11
VPS17YOR132W YER188C-AP0C0V2 99 aa1.86□□□□□ -2.11
VPS17YOR132W YKL065W-AQ2V2P2 73 aa1.86□□□□□ -2.11
VPS17YOR132W YMR001C-AQ8TGS9 76 aa1.86□□□□□ -2.11
VPS17YOR132W YLR255CO13574 117 aa1.84□□□□□ -2.11
VPS17YOR132W YHR073W-AP0C5N7 58 aa1.84□□□□□ -2.11
VPS17YOR132W YOR316C-AQ3E806 69 aa1.83□□□□□ -2.12
VPS17YOR132W YDR210WQ03482 75 aa1.83□□□□□ -2.12
VPS17YOR132W HUB1Q6Q546 73 aa1.83□□□□□ -2.12
VPS17YOR132W YGR146C-AQ8TGT9 53 aa1.83□□□□□ -2.12
VPS17YOR132W YNL122CP53921 115 aaPredicted RBP1.82□□□□□ -2.12
VPS17YOR132W YJL009WP47078 108 aa1.8□□□□□ -2.12
VPS17YOR132W MRX7P53869 86 aa1.79□□□□□ -2.12
VPS17YOR132W YIL156W-BQ2V2P4 73 aa1.79□□□□□ -2.12
VPS17YOR132W MDN1Q12019 4910 aaKnown RBP1.79□□□□□ -2.12
VPS17YOR132W YBR016WP38216 128 aa1.78□□□□□ -2.12
VPS17YOR132W YBR201C-AQ2V2Q3 67 aa1.77□□□□□ -2.13
VPS17YOR132W ATP17Q06405 101 aa1.76□□□□□ -2.13
VPS17YOR132W RPL37BP51402 88 aaKnown RBP1.75□□□□□ -2.13
VPS17YOR132W COX7P10174 60 aa1.74□□□□□ -2.13
VPS17YOR132W OLI1P61829 76 aa1.74□□□□□ -2.13
VPS17YOR132W YCR108CQ3E819 63 aa1.66□□□□□ -2.14
VPS17YOR132W HHY1P39982 102 aa1.64□□□□□ -2.15
VPS17YOR132W YOR394C-AQ8TGJ0 55 aa1.64□□□□□ -2.15
VPS17YOR132W YBL044WP38194 122 aa1.63□□□□□ -2.15
VPS17YOR132W RPL37AP49166 88 aaKnown RBP1.58□□□□□ -2.16
VPS17YOR132W Q0017Q9ZZX8 53 aa1.56□□□□□ -2.16
VPS17YOR132W YML054C-AQ3E809 52 aa1.53□□□□□ -2.16
VPS17YOR132W YBR072C-AQ3E794 53 aa1.51□□□□□ -2.17
VPS17YOR132W YOR072W-BQ3E832 53 aa1.49□□□□□ -2.17
VPS17YOR132W YLR157W-EP0CF00 54 aa1.42□□□□□ -2.18
VPS17YOR132W YOL164W-AQ3E7A5 60 aa1.36□□□□□ -2.19
VPS17YOR132W RPS29BP41058 56 aaKnown RBP1.19□□□□□ -2.22
VPS17YOR132W YHR050W-AQ05451 56 aa1.18□□□□□ -2.22
VPS17YOR132W RPS29AP41057 56 aaKnown RBP1.1□□□□□ -2.23
Retrieved 63 of 5,963 RNA–protein pairs in 38.4 ms