RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C SIP18P50263 79 aa1.98□□□□□ -2.09
SQS1YNL224C RPC10P40422 70 aa1.97□□□□□ -2.09
SQS1YNL224C HFA1P32874 2273 aa1.97□□□□□ -2.09
SQS1YNL224C YCR108CQ3E819 63 aa1.97□□□□□ -2.09
SQS1YNL224C RPL29P05747 59 aaPredicted RBP1.96□□□□□ -2.1
SQS1YNL224C YLR307C-AQ3E825 87 aa1.95□□□□□ -2.1
SQS1YNL224C YMR230W-AQ3E7B5 62 aa1.95□□□□□ -2.1
SQS1YNL224C PMP3P87284 55 aa1.94□□□□□ -2.1
SQS1YNL224C RPS27BP38711 82 aa1.94□□□□□ -2.1
SQS1YNL224C YNL162W-AQ3E7A8 72 aa1.94□□□□□ -2.1
SQS1YNL224C TAO3P40468 2376 aa1.93□□□□□ -2.1
SQS1YNL224C YBL044WP38194 122 aa1.92□□□□□ -2.1
SQS1YNL224C YJL127C-BQ3E828 52 aa1.92□□□□□ -2.1
SQS1YNL224C YBR230W-AQ3E762 66 aa1.91□□□□□ -2.1
SQS1YNL224C DDR2P89113 61 aa1.9□□□□□ -2.1
SQS1YNL224C YNL146C-AQ3E7Z1 64 aa1.89□□□□□ -2.11
SQS1YNL224C YMR105W-AQ8TGS8 64 aa1.88□□□□□ -2.11
SQS1YNL224C HOR7Q05827 59 aa1.88□□□□□ -2.11
SQS1YNL224C YJL009WP47078 108 aa1.87□□□□□ -2.11
SQS1YNL224C IRA1P18963 3092 aa1.87□□□□□ -2.11
SQS1YNL224C OLI1P61829 76 aa1.86□□□□□ -2.11
SQS1YNL224C YGR146C-AQ8TGT9 53 aa1.85□□□□□ -2.11
SQS1YNL224C TRA1P38811 3744 aa1.85□□□□□ -2.11
SQS1YNL224C YBR016WP38216 128 aa1.84□□□□□ -2.11
SQS1YNL224C RPL39P04650 51 aa1.84□□□□□ -2.12
SQS1YNL224C RPL37BP51402 88 aaKnown RBP1.84□□□□□ -2.12
SQS1YNL224C MEC1P38111 2368 aa1.82□□□□□ -2.12
SQS1YNL224C YHR212W-AP0CX91 67 aa1.82□□□□□ -2.12
SQS1YNL224C YHR086W-AQ3E746 53 aa1.81□□□□□ -2.12
SQS1YNL224C PRP8P33334 2413 aaKnown RBP1.79□□□□□ -2.12
SQS1YNL224C YIL046W-AQ3E7Z4 54 aa1.79□□□□□ -2.12
SQS1YNL224C HHY1P39982 102 aa1.79□□□□□ -2.12
SQS1YNL224C CSF1Q12150 2958 aa1.79□□□□□ -2.12
SQS1YNL224C YGL260WP53056 76 aa1.77□□□□□ -2.13
SQS1YNL224C YDR524C-BQ3E6R4 66 aa1.77□□□□□ -2.13
SQS1YNL224C GCN1P33892 2672 aaKnown RBP1.76□□□□□ -2.13
SQS1YNL224C YBR072C-AQ3E794 53 aa1.75□□□□□ -2.13
SQS1YNL224C YOR316C-AQ3E806 69 aa1.75□□□□□ -2.13
SQS1YNL224C YHR073W-AP0C5N7 58 aa1.73□□□□□ -2.13
SQS1YNL224C YOL164W-AQ3E7A5 60 aa1.67□□□□□ -2.14
SQS1YNL224C RPL37AP49166 88 aaKnown RBP1.65□□□□□ -2.15
SQS1YNL224C YLL066W-BQ8TGJ7 56 aa1.63□□□□□ -2.15
SQS1YNL224C YOR072W-BQ3E832 53 aa1.62□□□□□ -2.15
SQS1YNL224C UTP20P35194 2493 aaKnown RBP1.62□□□□□ -2.15
SQS1YNL224C YDR034C-AP0C289 58 aa1.61□□□□□ -2.15
SQS1YNL224C YLR157W-EP0CF00 54 aa1.54□□□□□ -2.16
SQS1YNL224C NUM1Q00402 2748 aa1.52□□□□□ -2.17
SQS1YNL224C FMP27Q06179 2628 aa1.49□□□□□ -2.17
SQS1YNL224C Q0297Q9ZZV8 51 aa1.48□□□□□ -2.17
SQS1YNL224C YML054C-AQ3E809 52 aa1.46□□□□□ -2.18
SQS1YNL224C YPR117WQ06116 2489 aa1.46□□□□□ -2.18
SQS1YNL224C TEL1P38110 2787 aa1.41□□□□□ -2.18
SQS1YNL224C TOR1P35169 2470 aa1.39□□□□□ -2.19
SQS1YNL224C DYN1P36022 4092 aa1.38□□□□□ -2.19
SQS1YNL224C TOR2P32600 2474 aaKnown RBP1.37□□□□□ -2.19
SQS1YNL224C Q0017Q9ZZX8 53 aa1.37□□□□□ -2.19
SQS1YNL224C MDN1Q12019 4910 aaKnown RBP1.35□□□□□ -2.19
SQS1YNL224C YDR034W-BQ6Q5X2 51 aa1.3□□□□□ -2.2
SQS1YNL224C YHR050W-AQ05451 56 aa1.27□□□□□ -2.21
SQS1YNL224C RPS29AP41057 56 aaKnown RBP1.24□□□□□ -2.21
SQS1YNL224C RPS29BP41058 56 aaKnown RBP1.18□□□□□ -2.22
SQS1YNL224C CUP1-1P0CX80 61 aa0.99□□□□□ -2.25
SQS1YNL224C CUP1-2P0CX81 61 aa0.99□□□□□ -2.25
Retrieved 63 of 5,963 RNA–protein pairs in 10.6 ms