RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C SIP18P50263 79 aa1.98□□□□□ -2.09
SQS1YNL224C RPC10P40422 70 aa1.97□□□□□ -2.09
SQS1YNL224C HFA1P32874 2273 aa1.97□□□□□ -2.09
SQS1YNL224C YCR108CQ3E819 63 aa1.97□□□□□ -2.09
SQS1YNL224C RPL29P05747 59 aaPredicted RBP1.96□□□□□ -2.1
SQS1YNL224C YLR307C-AQ3E825 87 aa1.95□□□□□ -2.1
SQS1YNL224C YMR230W-AQ3E7B5 62 aa1.95□□□□□ -2.1
SQS1YNL224C PMP3P87284 55 aa1.94□□□□□ -2.1
SQS1YNL224C RPS27BP38711 82 aa1.94□□□□□ -2.1
SQS1YNL224C YNL162W-AQ3E7A8 72 aa1.94□□□□□ -2.1
SQS1YNL224C TAO3P40468 2376 aa1.93□□□□□ -2.1
SQS1YNL224C YBL044WP38194 122 aa1.92□□□□□ -2.1
SQS1YNL224C YJL127C-BQ3E828 52 aa1.92□□□□□ -2.1
SQS1YNL224C YBR230W-AQ3E762 66 aa1.91□□□□□ -2.1
SQS1YNL224C DDR2P89113 61 aa1.9□□□□□ -2.1
SQS1YNL224C YNL146C-AQ3E7Z1 64 aa1.89□□□□□ -2.11
SQS1YNL224C YMR105W-AQ8TGS8 64 aa1.88□□□□□ -2.11
SQS1YNL224C HOR7Q05827 59 aa1.88□□□□□ -2.11
SQS1YNL224C YJL009WP47078 108 aa1.87□□□□□ -2.11
SQS1YNL224C IRA1P18963 3092 aa1.87□□□□□ -2.11
SQS1YNL224C OLI1P61829 76 aa1.86□□□□□ -2.11
SQS1YNL224C YGR146C-AQ8TGT9 53 aa1.85□□□□□ -2.11
SQS1YNL224C TRA1P38811 3744 aa1.85□□□□□ -2.11
SQS1YNL224C YBR016WP38216 128 aa1.84□□□□□ -2.11
SQS1YNL224C RPL39P04650 51 aa1.84□□□□□ -2.12
SQS1YNL224C RPL37BP51402 88 aaKnown RBP1.84□□□□□ -2.12
SQS1YNL224C MEC1P38111 2368 aa1.82□□□□□ -2.12
SQS1YNL224C YHR212W-AP0CX91 67 aa1.82□□□□□ -2.12
SQS1YNL224C YHR086W-AQ3E746 53 aa1.81□□□□□ -2.12
SQS1YNL224C PRP8P33334 2413 aaKnown RBP1.79□□□□□ -2.12
SQS1YNL224C YIL046W-AQ3E7Z4 54 aa1.79□□□□□ -2.12
SQS1YNL224C HHY1P39982 102 aa1.79□□□□□ -2.12
SQS1YNL224C CSF1Q12150 2958 aa1.79□□□□□ -2.12
SQS1YNL224C YGL260WP53056 76 aa1.77□□□□□ -2.13
SQS1YNL224C YDR524C-BQ3E6R4 66 aa1.77□□□□□ -2.13
SQS1YNL224C GCN1P33892 2672 aaKnown RBP1.76□□□□□ -2.13
SQS1YNL224C YBR072C-AQ3E794 53 aa1.75□□□□□ -2.13
SQS1YNL224C YOR316C-AQ3E806 69 aa1.75□□□□□ -2.13
SQS1YNL224C YHR073W-AP0C5N7 58 aa1.73□□□□□ -2.13
SQS1YNL224C YOL164W-AQ3E7A5 60 aa1.67□□□□□ -2.14
SQS1YNL224C RPL37AP49166 88 aaKnown RBP1.65□□□□□ -2.15
SQS1YNL224C YLL066W-BQ8TGJ7 56 aa1.63□□□□□ -2.15
SQS1YNL224C YOR072W-BQ3E832 53 aa1.62□□□□□ -2.15
SQS1YNL224C UTP20P35194 2493 aaKnown RBP1.62□□□□□ -2.15
SQS1YNL224C YDR034C-AP0C289 58 aa1.61□□□□□ -2.15
SQS1YNL224C YLR157W-EP0CF00 54 aa1.54□□□□□ -2.16
SQS1YNL224C NUM1Q00402 2748 aa1.52□□□□□ -2.17
SQS1YNL224C FMP27Q06179 2628 aa1.49□□□□□ -2.17
SQS1YNL224C Q0297Q9ZZV8 51 aa1.48□□□□□ -2.17
SQS1YNL224C YML054C-AQ3E809 52 aa1.46□□□□□ -2.18
SQS1YNL224C YPR117WQ06116 2489 aa1.46□□□□□ -2.18
SQS1YNL224C TEL1P38110 2787 aa1.41□□□□□ -2.18
SQS1YNL224C TOR1P35169 2470 aa1.39□□□□□ -2.19
SQS1YNL224C DYN1P36022 4092 aa1.38□□□□□ -2.19
SQS1YNL224C TOR2P32600 2474 aaKnown RBP1.37□□□□□ -2.19
SQS1YNL224C Q0017Q9ZZX8 53 aa1.37□□□□□ -2.19
SQS1YNL224C MDN1Q12019 4910 aaKnown RBP1.35□□□□□ -2.19
SQS1YNL224C YDR034W-BQ6Q5X2 51 aa1.3□□□□□ -2.2
SQS1YNL224C YHR050W-AQ05451 56 aa1.27□□□□□ -2.21
SQS1YNL224C RPS29AP41057 56 aaKnown RBP1.24□□□□□ -2.21
SQS1YNL224C RPS29BP41058 56 aaKnown RBP1.18□□□□□ -2.22
SQS1YNL224C CUP1-1P0CX80 61 aa0.99□□□□□ -2.25
SQS1YNL224C CUP1-2P0CX81 61 aa0.99□□□□□ -2.25
Retrieved 63 of 5,963 RNA–protein pairs in 46.6 ms