RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A YHR213W-BQ8TGK1 99 aa1.38□□□□□ -2.19
YSF3YNL138W-A YLR255CO13574 117 aa1.37□□□□□ -2.19
YSF3YNL138W-A PAU23Q07987 124 aa1.37□□□□□ -2.19
YSF3YNL138W-A PAU17Q12370 124 aa1.37□□□□□ -2.19
YSF3YNL138W-A YOR314WQ12506 109 aa1.36□□□□□ -2.19
YSF3YNL138W-A YKL023C-AQ2V2P3 75 aa1.36□□□□□ -2.19
YSF3YNL138W-A Q0017Q9ZZX8 53 aa1.36□□□□□ -2.19
YSF3YNL138W-A YER188C-AP0C0V2 99 aa1.35□□□□□ -2.19
YSF3YNL138W-A COX7P10174 60 aa1.34□□□□□ -2.19
YSF3YNL138W-A YDR119W-AQ2V2P9 66 aa1.34□□□□□ -2.19
YSF3YNL138W-A YNL042W-BQ3E7Z2 85 aa1.33□□□□□ -2.2
YSF3YNL138W-A PAU7P39545 55 aa1.32□□□□□ -2.2
YSF3YNL138W-A YBR072C-AQ3E794 53 aa1.32□□□□□ -2.2
YSF3YNL138W-A YOR008C-AQ3E7B9 74 aa1.31□□□□□ -2.2
YSF3YNL138W-A YFL041W-AQ3E817 63 aa1.31□□□□□ -2.2
YSF3YNL138W-A NOP10Q6Q547 58 aaPredicted RBP1.31□□□□□ -2.2
YSF3YNL138W-A YBR201C-AQ2V2Q3 67 aa1.3□□□□□ -2.2
YSF3YNL138W-A SSS1P35179 80 aa1.29□□□□□ -2.2
YSF3YNL138W-A ATP18P81450 59 aa1.29□□□□□ -2.2
YSF3YNL138W-A YOL097W-AQ3E7Y9 61 aa1.29□□□□□ -2.2
YSF3YNL138W-A RPL38P49167 78 aaKnown RBP1.28□□□□□ -2.2
YSF3YNL138W-A YNL190WP53872 204 aa1.28□□□□□ -2.2
YSF3YNL138W-A YIL156W-BQ2V2P4 73 aa1.28□□□□□ -2.2
YSF3YNL138W-A YOR034C-AQ3E735 80 aa1.28□□□□□ -2.2
YSF3YNL138W-A TOS6P48560 102 aa1.27□□□□□ -2.21
YSF3YNL138W-A YLL006W-AQ3E814 58 aa1.27□□□□□ -2.21
YSF3YNL138W-A RPL29P05747 59 aaPredicted RBP1.26□□□□□ -2.21
YSF3YNL138W-A SDH6Q3E785 79 aa1.26□□□□□ -2.21
YSF3YNL138W-A YNL198CP40166 100 aa1.25□□□□□ -2.21
YSF3YNL138W-A YBR230W-AQ3E762 66 aa1.25□□□□□ -2.21
YSF3YNL138W-A YJR107C-AP0CT86 78 aa1.24□□□□□ -2.21
YSF3YNL138W-A RPL37AP49166 88 aaKnown RBP1.24□□□□□ -2.21
YSF3YNL138W-A VMA9Q3E7B6 73 aa1.24□□□□□ -2.21
YSF3YNL138W-A YJL127C-BQ3E828 52 aa1.24□□□□□ -2.21
YSF3YNL138W-A YSY6P38374 65 aa1.23□□□□□ -2.21
YSF3YNL138W-A ATP17Q06405 101 aa1.23□□□□□ -2.21
YSF3YNL138W-A YIL102C-AQ2V2P5 75 aa1.23□□□□□ -2.21
YSF3YNL138W-A HUB1Q6Q546 73 aa1.23□□□□□ -2.21
YSF3YNL138W-A YDL022C-AP0C5L6 82 aa1.2□□□□□ -2.22
YSF3YNL138W-A YLR157W-EP0CF00 54 aa1.18□□□□□ -2.22
YSF3YNL138W-A YOL164W-AQ3E7A5 60 aa1.18□□□□□ -2.22
YSF3YNL138W-A YIL134C-AQ45U18 67 aa1.18□□□□□ -2.22
YSF3YNL138W-A YLR157W-DP0CE99 70 aa1.17□□□□□ -2.22
YSF3YNL138W-A YDR182W-AQ3E796 67 aa1.17□□□□□ -2.22
YSF3YNL138W-A YHR073W-AP0C5N7 58 aa1.16□□□□□ -2.22
YSF3YNL138W-A YBR016WP38216 128 aa1.15□□□□□ -2.23
YSF3YNL138W-A EDC1P53080 175 aaPredicted RBP1.15□□□□□ -2.23
YSF3YNL138W-A RPS30AP0CX33 63 aaKnown RBP1.13□□□□□ -2.23
YSF3YNL138W-A RPS30BP0CX34 63 aaKnown RBP1.13□□□□□ -2.23
YSF3YNL138W-A OLI1P61829 76 aa1.13□□□□□ -2.23
YSF3YNL138W-A YDR246W-AQ3E763 66 aa1.11□□□□□ -2.23
YSF3YNL138W-A YFR009W-AP0C5M9 85 aa1.08□□□□□ -2.24
YSF3YNL138W-A YOR394C-AQ8TGJ0 55 aa1.07□□□□□ -2.24
YSF3YNL138W-A YMR001C-AQ8TGS9 76 aa1.07□□□□□ -2.24
YSF3YNL138W-A YOL166W-AQ8TGJ1 51 aa1.04□□□□□ -2.24
YSF3YNL138W-A YOR316C-AQ3E806 69 aa1.02□□□□□ -2.25
YSF3YNL138W-A YML054C-AQ3E809 52 aa1.02□□□□□ -2.25
YSF3YNL138W-A YJL133C-AQ3E7A3 74 aa1□□□□□ -2.25
YSF3YNL138W-A YBL044WP38194 122 aa0.97□□□□□ -2.25
YSF3YNL138W-A YGR146C-AQ8TGT9 53 aa0.89□□□□□ -2.27
YSF3YNL138W-A YCR108CQ3E819 63 aa0.88□□□□□ -2.27
YSF3YNL138W-A YOR072W-BQ3E832 53 aa0.79□□□□□ -2.28
YSF3YNL138W-A YHR050W-AQ05451 56 aa0.58□□□□□ -2.32
Retrieved 63 of 5,963 RNA–protein pairs in 80.7 ms