RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W COX19Q3E731 98 aa2.1□□□□□ -2.07
PUB1YNL016W YIL102CP40488 101 aa2.07□□□□□ -2.08
PUB1YNL016W YJR128WP47162 119 aa2.07□□□□□ -2.08
PUB1YNL016W YNL042W-BQ3E7Z2 85 aa2.07□□□□□ -2.08
PUB1YNL016W YIL134C-AQ45U18 67 aa2.06□□□□□ -2.08
PUB1YNL016W RPC10P40422 70 aa2.05□□□□□ -2.08
PUB1YNL016W YBR201C-AQ2V2Q3 67 aa2.05□□□□□ -2.08
PUB1YNL016W HHY1P39982 102 aa2.04□□□□□ -2.08
PUB1YNL016W VMA9Q3E7B6 73 aa2.04□□□□□ -2.08
PUB1YNL016W Q0032Q9ZZX7 96 aa2.04□□□□□ -2.08
PUB1YNL016W YDL022C-AP0C5L6 82 aa2.02□□□□□ -2.09
PUB1YNL016W YIL102C-AQ2V2P5 75 aa2.02□□□□□ -2.09
PUB1YNL016W PAU7P39545 55 aa2.01□□□□□ -2.09
PUB1YNL016W YSY6P38374 65 aa1.99□□□□□ -2.09
PUB1YNL016W ATP18P81450 59 aa1.99□□□□□ -2.09
PUB1YNL016W YHR213W-BQ8TGK1 99 aa1.98□□□□□ -2.09
PUB1YNL016W COX7P10174 60 aa1.96□□□□□ -2.1
PUB1YNL016W YNL190WP53872 204 aa1.95□□□□□ -2.1
PUB1YNL016W ATP17Q06405 101 aa1.95□□□□□ -2.1
PUB1YNL016W YOR034C-AQ3E735 80 aa1.95□□□□□ -2.1
PUB1YNL016W YDR246W-AQ3E763 66 aa1.94□□□□□ -2.1
PUB1YNL016W SDH6Q3E785 79 aa1.93□□□□□ -2.1
PUB1YNL016W YOL097W-AQ3E7Y9 61 aa1.92□□□□□ -2.1
PUB1YNL016W RPL37BP51402 88 aaKnown RBP1.91□□□□□ -2.1
PUB1YNL016W YBR072C-AQ3E794 53 aa1.91□□□□□ -2.1
PUB1YNL016W YOR008C-AQ3E7B9 74 aa1.91□□□□□ -2.1
PUB1YNL016W RPL38P49167 78 aaKnown RBP1.9□□□□□ -2.11
PUB1YNL016W YBL039W-BP0C268 59 aa1.89□□□□□ -2.11
PUB1YNL016W TOS6P48560 102 aa1.89□□□□□ -2.11
PUB1YNL016W RPS30AP0CX33 63 aaKnown RBP1.87□□□□□ -2.11
PUB1YNL016W RPS30BP0CX34 63 aaKnown RBP1.87□□□□□ -2.11
PUB1YNL016W YDR182W-AQ3E796 67 aa1.86□□□□□ -2.11
PUB1YNL016W HUB1Q6Q546 73 aa1.86□□□□□ -2.11
PUB1YNL016W YJR107C-AP0CT86 78 aa1.85□□□□□ -2.11
PUB1YNL016W YKL023C-AQ2V2P3 75 aa1.85□□□□□ -2.11
PUB1YNL016W DDR2P89113 61 aa1.85□□□□□ -2.11
PUB1YNL016W EDC1P53080 175 aaPredicted RBP1.83□□□□□ -2.12
PUB1YNL016W YLL006W-AQ3E814 58 aa1.83□□□□□ -2.12
PUB1YNL016W RPL29P05747 59 aaPredicted RBP1.81□□□□□ -2.12
PUB1YNL016W YBR230W-AQ3E762 66 aa1.77□□□□□ -2.13
PUB1YNL016W RPL37AP49166 88 aaKnown RBP1.76□□□□□ -2.13
PUB1YNL016W YJL127C-BQ3E828 52 aa1.76□□□□□ -2.13
PUB1YNL016W YOL166W-AQ8TGJ1 51 aa1.76□□□□□ -2.13
PUB1YNL016W YLR157W-EP0CF00 54 aa1.75□□□□□ -2.13
PUB1YNL016W YOL164W-AQ3E7A5 60 aa1.75□□□□□ -2.13
PUB1YNL016W YLR157W-DP0CE99 70 aa1.72□□□□□ -2.13
PUB1YNL016W YMR001C-AQ8TGS9 76 aa1.72□□□□□ -2.13
PUB1YNL016W Q0017Q9ZZX8 53 aa1.69□□□□□ -2.14
PUB1YNL016W OLI1P61829 76 aa1.68□□□□□ -2.14
PUB1YNL016W YOR394C-AQ8TGJ0 55 aa1.68□□□□□ -2.14
PUB1YNL016W RPS29AP41057 56 aaKnown RBP1.66□□□□□ -2.14
PUB1YNL016W YFR009W-AP0C5M9 85 aa1.63□□□□□ -2.15
PUB1YNL016W RPS29BP41058 56 aaKnown RBP1.62□□□□□ -2.15
PUB1YNL016W YBR016WP38216 128 aa1.59□□□□□ -2.15
PUB1YNL016W YHR073W-AP0C5N7 58 aa1.54□□□□□ -2.16
PUB1YNL016W YJL133C-AQ3E7A3 74 aa1.54□□□□□ -2.16
PUB1YNL016W YBL044WP38194 122 aa1.53□□□□□ -2.16
PUB1YNL016W YOR316C-AQ3E806 69 aa1.49□□□□□ -2.17
PUB1YNL016W YML054C-AQ3E809 52 aa1.43□□□□□ -2.18
PUB1YNL016W YCR108CQ3E819 63 aa1.42□□□□□ -2.18
PUB1YNL016W YGR146C-AQ8TGT9 53 aa1.39□□□□□ -2.19
PUB1YNL016W YOR072W-BQ3E832 53 aa1.19□□□□□ -2.22
PUB1YNL016W YHR050W-AQ05451 56 aa0.85□□□□□ -2.27
Retrieved 63 of 5,963 RNA–protein pairs in 29.4 ms