RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C YDR381C-AQ3E6R5 114 aa2.28□□□□□ -2.04
CCS1YMR038C YOR376W-AQ3E805 51 aa2.28□□□□□ -2.04
CCS1YMR038C COX23P38824 151 aa2.27□□□□□ -2.05
CCS1YMR038C EMC6Q12431 108 aa2.26□□□□□ -2.05
CCS1YMR038C RPL38P49167 78 aaKnown RBP2.24□□□□□ -2.05
CCS1YMR038C YPR153WQ06537 140 aa2.24□□□□□ -2.05
CCS1YMR038C YDR246W-AQ3E763 66 aa2.24□□□□□ -2.05
CCS1YMR038C YOR316C-AQ3E806 69 aa2.24□□□□□ -2.05
CCS1YMR038C RPL36AP05745 100 aaPredicted RBP2.22□□□□□ -2.05
CCS1YMR038C YSY6P38374 65 aa2.22□□□□□ -2.05
CCS1YMR038C AIM4P38305 123 aaPredicted RBP2.21□□□□□ -2.06
CCS1YMR038C YAR064WP39563 99 aa2.21□□□□□ -2.06
CCS1YMR038C YML100W-AQ8TGT0 57 aa2.21□□□□□ -2.06
CCS1YMR038C TDA2P40045 126 aa2.2□□□□□ -2.06
CCS1YMR038C YBL008W-AQ3E821 79 aa2.2□□□□□ -2.06
CCS1YMR038C YOR381W-AQ3E804 55 aa2.19□□□□□ -2.06
CCS1YMR038C YLR285C-AQ3E771 56 aa2.17□□□□□ -2.06
CCS1YMR038C ATP20Q12233 115 aa2.16□□□□□ -2.06
CCS1YMR038C YOR314WQ12506 109 aa2.16□□□□□ -2.06
CCS1YMR038C YER188C-AP0C0V2 99 aa2.14□□□□□ -2.07
CCS1YMR038C YHR086W-AQ3E746 53 aa2.14□□□□□ -2.07
CCS1YMR038C YMR122CQ03879 124 aa2.13□□□□□ -2.07
CCS1YMR038C NOP10Q6Q547 58 aaPredicted RBP2.13□□□□□ -2.07
CCS1YMR038C OST5Q92316 86 aa2.13□□□□□ -2.07
CCS1YMR038C YOL166W-AQ8TGJ1 51 aa2.12□□□□□ -2.07
CCS1YMR038C YFR032C-BQ8TGU2 87 aa2.12□□□□□ -2.07
CCS1YMR038C QCR10P37299 77 aa2.11□□□□□ -2.07
CCS1YMR038C YBR016WP38216 128 aa2.11□□□□□ -2.07
CCS1YMR038C YHR032W-AP0C5N6 59 aa2.1□□□□□ -2.07
CCS1YMR038C RPS30AP0CX33 63 aaKnown RBP2.1□□□□□ -2.07
CCS1YMR038C RPS30BP0CX34 63 aaKnown RBP2.1□□□□□ -2.07
CCS1YMR038C YKL065W-AQ2V2P2 73 aa2.09□□□□□ -2.07
CCS1YMR038C YDR182W-AQ3E796 67 aa2.09□□□□□ -2.07
CCS1YMR038C YHR125WP38831 101 aa2.08□□□□□ -2.08
CCS1YMR038C LIP1Q03579 150 aa2.08□□□□□ -2.08
CCS1YMR038C YIL156W-BQ2V2P4 73 aa2.08□□□□□ -2.08
CCS1YMR038C SOM1Q05676 74 aa2.07□□□□□ -2.08
CCS1YMR038C YML054C-AQ3E809 52 aa2.07□□□□□ -2.08
CCS1YMR038C YLR255CO13574 117 aa2.04□□□□□ -2.08
CCS1YMR038C YGR146C-AQ8TGT9 53 aa2.04□□□□□ -2.08
CCS1YMR038C COX8P04039 78 aa2.03□□□□□ -2.08
CCS1YMR038C YBL044WP38194 122 aa2.03□□□□□ -2.08
CCS1YMR038C YOL013W-AP0C272 63 aaPredicted RBP2.02□□□□□ -2.09
CCS1YMR038C YCR095W-AQ3E787 52 aa2.02□□□□□ -2.09
CCS1YMR038C YIL102CP40488 101 aa2□□□□□ -2.09
CCS1YMR038C RPL37AP49166 88 aaKnown RBP2□□□□□ -2.09
CCS1YMR038C MRX7P53869 86 aa2□□□□□ -2.09
CCS1YMR038C OLI1P61829 76 aa1.99□□□□□ -2.09
CCS1YMR038C ATP17Q06405 101 aa1.97□□□□□ -2.09
CCS1YMR038C HUB1Q6Q546 73 aa1.97□□□□□ -2.09
CCS1YMR038C YMR001C-AQ8TGS9 76 aa1.96□□□□□ -2.1
CCS1YMR038C SDH6Q3E785 79 aa1.95□□□□□ -2.1
CCS1YMR038C YGL014C-AP0C5N1 53 aa1.91□□□□□ -2.1
CCS1YMR038C YEL014CP39999 101 aa1.85□□□□□ -2.11
CCS1YMR038C YBR201C-AQ2V2Q3 67 aa1.84□□□□□ -2.11
CCS1YMR038C YOR394C-AQ8TGJ0 55 aa1.8□□□□□ -2.12
CCS1YMR038C YCR108CQ3E819 63 aa1.73□□□□□ -2.13
CCS1YMR038C YOR072W-BQ3E832 53 aa1.54□□□□□ -2.16
CCS1YMR038C HHY1P39982 102 aa1.53□□□□□ -2.16
CCS1YMR038C YBR072C-AQ3E794 53 aa1.52□□□□□ -2.17
CCS1YMR038C YOL164W-AQ3E7A5 60 aa1.41□□□□□ -2.18
CCS1YMR038C YHR050W-AQ05451 56 aa1.31□□□□□ -2.2
CCS1YMR038C YLR157W-EP0CF00 54 aa1.22□□□□□ -2.21
Retrieved 63 of 5,963 RNA–protein pairs in 66.1 ms