RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C YOR316C-AQ3E806 69 aa5.43□□□□□ -1.54
SEC61YLR378C YHR125WP38831 101 aa5.4□□□□□ -1.54
SEC61YLR378C YJR128WP47162 119 aa5.4□□□□□ -1.54
SEC61YLR378C YGR164WP53291 111 aa5.4□□□□□ -1.54
SEC61YLR378C RPS30AP0CX33 63 aaKnown RBP5.38□□□□□ -1.55
SEC61YLR378C RPS30BP0CX34 63 aaKnown RBP5.38□□□□□ -1.55
SEC61YLR378C SDH6Q3E785 79 aa5.35□□□□□ -1.55
SEC61YLR378C YGR146C-AQ8TGT9 53 aa5.34□□□□□ -1.55
SEC61YLR378C YIR021W-AQ3E739 70 aa5.33□□□□□ -1.56
SEC61YLR378C YKL065W-AQ2V2P2 73 aa5.32□□□□□ -1.56
SEC61YLR378C COX8P04039 78 aa5.31□□□□□ -1.56
SEC61YLR378C YFR032C-BQ8TGU2 87 aa5.31□□□□□ -1.56
SEC61YLR378C YLR255CO13574 117 aa5.3□□□□□ -1.56
SEC61YLR378C YJL144WP47009 104 aa5.26□□□□□ -1.57
SEC61YLR378C OST5Q92316 86 aa5.26□□□□□ -1.57
SEC61YLR378C YBL008W-AQ3E821 79 aa5.23□□□□□ -1.57
SEC61YLR378C YMR001C-AQ8TGS9 76 aa5.23□□□□□ -1.57
SEC61YLR378C HUB1Q6Q546 73 aa5.23□□□□□ -1.57
SEC61YLR378C OLI1P61829 76 aa5.21□□□□□ -1.58
SEC61YLR378C YBR016WP38216 128 aa5.2□□□□□ -1.58
SEC61YLR378C YIL156W-BQ2V2P4 73 aa5.19□□□□□ -1.58
SEC61YLR378C YBR201C-AQ2V2Q3 67 aa5.18□□□□□ -1.58
SEC61YLR378C RPL37BP51402 88 aaKnown RBP5.15□□□□□ -1.58
SEC61YLR378C MRX7P53869 86 aa5.14□□□□□ -1.59
SEC61YLR378C YOR381W-AQ3E804 55 aa5.12□□□□□ -1.59
SEC61YLR378C YMR122CQ03879 124 aa5.1□□□□□ -1.59
SEC61YLR378C Q0017Q9ZZX8 53 aa5.1□□□□□ -1.59
SEC61YLR378C FYV12Q08559 129 aa5.09□□□□□ -1.59
SEC61YLR378C SBH1P52870 82 aa5.06□□□□□ -1.6
SEC61YLR378C YGL034CP53186 121 aa5.04□□□□□ -1.6
SEC61YLR378C YCR095W-AQ3E787 52 aa4.99□□□□□ -1.61
SEC61YLR378C YER188C-AP0C0V2 99 aa4.98□□□□□ -1.61
SEC61YLR378C YJL009WP47078 108 aa4.96□□□□□ -1.62
SEC61YLR378C YML054C-AQ3E809 52 aa4.89□□□□□ -1.63
SEC61YLR378C YBL044WP38194 122 aa4.86□□□□□ -1.63
SEC61YLR378C ATP17Q06405 101 aa4.86□□□□□ -1.63
SEC61YLR378C YLR412C-AQ3E742 68 aa4.81□□□□□ -1.64
SEC61YLR378C YOR394C-AQ8TGJ0 55 aa4.8□□□□□ -1.64
SEC61YLR378C YDR210WQ03482 75 aa4.79□□□□□ -1.64
SEC61YLR378C YEL014CP39999 101 aa4.69□□□□□ -1.66
SEC61YLR378C YCR108CQ3E819 63 aa4.64□□□□□ -1.67
SEC61YLR378C YBR121C-AP0C5L4 52 aa4.63□□□□□ -1.67
SEC61YLR378C RPS28BP0C0X0 67 aaKnown RBP4.57□□□□□ -1.68
SEC61YLR378C RPL37AP49166 88 aaKnown RBP4.57□□□□□ -1.68
SEC61YLR378C RPS28AQ3E7X9 67 aaPredicted RBP4.57□□□□□ -1.68
SEC61YLR378C QCR10P37299 77 aa4.55□□□□□ -1.68
SEC61YLR378C YNL277W-AQ3E7Z0 62 aa4.54□□□□□ -1.68
SEC61YLR378C YER078W-AQ3E7A2 54 aa4.49□□□□□ -1.69
SEC61YLR378C YOR072W-BQ3E832 53 aa4.45□□□□□ -1.7
SEC61YLR378C YGL014C-AP0C5N1 53 aa4.43□□□□□ -1.7
SEC61YLR378C YML100W-AQ8TGT0 57 aa4.33□□□□□ -1.72
SEC61YLR378C SOM1Q05676 74 aa4.31□□□□□ -1.72
SEC61YLR378C YOR376W-AQ3E805 51 aa4.26□□□□□ -1.73
SEC61YLR378C HHY1P39982 102 aa4.22□□□□□ -1.73
SEC61YLR378C YBR072C-AQ3E794 53 aa4.15□□□□□ -1.74
SEC61YLR378C YAL067W-AQ8TGK6 75 aa4.15□□□□□ -1.74
SEC61YLR378C RPS29BP41058 56 aaKnown RBP4.14□□□□□ -1.75
SEC61YLR378C RPS29AP41057 56 aaKnown RBP3.98□□□□□ -1.77
SEC61YLR378C YHR032W-AP0C5N6 59 aa3.78□□□□□ -1.8
SEC61YLR378C YHR050W-AQ05451 56 aa3.64□□□□□ -1.83
SEC61YLR378C YHR086W-AQ3E746 53 aa3.21□□□□□ -1.9
SEC61YLR378C YOL164W-AQ3E7A5 60 aa3.16□□□□□ -1.9
SEC61YLR378C YLR157W-EP0CF00 54 aa2.98□□□□□ -1.93
Retrieved 63 of 5,963 RNA–protein pairs in 23 ms