RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C YJL144WP47009 104 aa5.81□□□□□ -1.48
SHM2YLR058C YIL002W-AQ3E7Z5 69 aa5.81□□□□□ -1.48
SHM2YLR058C YDR182W-AQ3E796 67 aa5.8□□□□□ -1.48
SHM2YLR058C YHR125WP38831 101 aa5.78□□□□□ -1.48
SHM2YLR058C TOM6P33448 61 aa5.77□□□□□ -1.49
SHM2YLR058C YGR146C-AQ8TGT9 53 aa5.76□□□□□ -1.49
SHM2YLR058C YLR255CO13574 117 aa5.75□□□□□ -1.49
SHM2YLR058C COX8P04039 78 aa5.72□□□□□ -1.49
SHM2YLR058C YKL065W-AQ2V2P2 73 aa5.72□□□□□ -1.49
SHM2YLR058C YBR016WP38216 128 aa5.68□□□□□ -1.5
SHM2YLR058C YBL008W-AQ3E821 79 aa5.67□□□□□ -1.5
SHM2YLR058C RPS30AP0CX33 63 aaKnown RBP5.65□□□□□ -1.5
SHM2YLR058C RPS30BP0CX34 63 aaKnown RBP5.65□□□□□ -1.5
SHM2YLR058C FYV12Q08559 129 aa5.65□□□□□ -1.5
SHM2YLR058C Q0017Q9ZZX8 53 aa5.65□□□□□ -1.5
SHM2YLR058C YFR032C-BQ8TGU2 87 aa5.65□□□□□ -1.51
SHM2YLR058C SDH6Q3E785 79 aa5.61□□□□□ -1.51
SHM2YLR058C OLI1P61829 76 aa5.59□□□□□ -1.51
SHM2YLR058C YIL156W-BQ2V2P4 73 aa5.57□□□□□ -1.52
SHM2YLR058C YJL009WP47078 108 aa5.55□□□□□ -1.52
SHM2YLR058C OST5Q92316 86 aa5.52□□□□□ -1.53
SHM2YLR058C YMR001C-AQ8TGS9 76 aa5.51□□□□□ -1.53
SHM2YLR058C YBR201C-AQ2V2Q3 67 aa5.5□□□□□ -1.53
SHM2YLR058C YGL034CP53186 121 aa5.49□□□□□ -1.53
SHM2YLR058C MRX7P53869 86 aa5.46□□□□□ -1.54
SHM2YLR058C YDR210WQ03482 75 aa5.4□□□□□ -1.54
SHM2YLR058C HUB1Q6Q546 73 aa5.4□□□□□ -1.54
SHM2YLR058C YBL044WP38194 122 aa5.31□□□□□ -1.56
SHM2YLR058C YML054C-AQ3E809 52 aa5.29□□□□□ -1.56
SHM2YLR058C YIR021W-AQ3E739 70 aa5.27□□□□□ -1.57
SHM2YLR058C YMR122CQ03879 124 aa5.25□□□□□ -1.57
SHM2YLR058C YOR381W-AQ3E804 55 aa5.23□□□□□ -1.57
SHM2YLR058C YOR394C-AQ8TGJ0 55 aa5.14□□□□□ -1.59
SHM2YLR058C YCR095W-AQ3E787 52 aa5.12□□□□□ -1.59
SHM2YLR058C YER188C-AP0C0V2 99 aa5.11□□□□□ -1.59
SHM2YLR058C ATP17Q06405 101 aa5.09□□□□□ -1.59
SHM2YLR058C SBH1P52870 82 aa5.02□□□□□ -1.61
SHM2YLR058C YCR108CQ3E819 63 aa4.94□□□□□ -1.62
SHM2YLR058C RPL37AP49166 88 aaKnown RBP4.9□□□□□ -1.62
SHM2YLR058C YEL014CP39999 101 aa4.88□□□□□ -1.63
SHM2YLR058C YLR412C-AQ3E742 68 aa4.72□□□□□ -1.65
SHM2YLR058C RPS29BP41058 56 aaKnown RBP4.7□□□□□ -1.66
SHM2YLR058C YBR121C-AP0C5L4 52 aa4.69□□□□□ -1.66
SHM2YLR058C QCR10P37299 77 aa4.69□□□□□ -1.66
SHM2YLR058C YOR072W-BQ3E832 53 aa4.68□□□□□ -1.66
SHM2YLR058C RPS28BP0C0X0 67 aaKnown RBP4.67□□□□□ -1.66
SHM2YLR058C RPS28AQ3E7X9 67 aaPredicted RBP4.67□□□□□ -1.66
SHM2YLR058C YER175W-AQ8TGU4 54 aa4.58□□□□□ -1.68
SHM2YLR058C RPS29AP41057 56 aaKnown RBP4.55□□□□□ -1.68
SHM2YLR058C YGL014C-AP0C5N1 53 aa4.5□□□□□ -1.69
SHM2YLR058C HHY1P39982 102 aa4.41□□□□□ -1.7
SHM2YLR058C YNL277W-AQ3E7Z0 62 aa4.39□□□□□ -1.71
SHM2YLR058C SOM1Q05676 74 aa4.37□□□□□ -1.71
SHM2YLR058C YBR072C-AQ3E794 53 aa4.24□□□□□ -1.73
SHM2YLR058C YML100W-AQ8TGT0 57 aa4.21□□□□□ -1.73
SHM2YLR058C YOR376W-AQ3E805 51 aa4.16□□□□□ -1.74
SHM2YLR058C YHR050W-AQ05451 56 aa3.83□□□□□ -1.8
SHM2YLR058C YER078W-AQ3E7A2 54 aa3.67□□□□□ -1.82
SHM2YLR058C YHR032W-AP0C5N6 59 aa3.58□□□□□ -1.84
SHM2YLR058C YAL067W-AQ8TGK6 75 aa3.53□□□□□ -1.85
SHM2YLR058C YOL164W-AQ3E7A5 60 aa3.18□□□□□ -1.9
SHM2YLR058C YLR157W-EP0CF00 54 aa3.05□□□□□ -1.92
SHM2YLR058C YHR086W-AQ3E746 53 aa2.8□□□□□ -1.96
Retrieved 63 of 5,963 RNA–protein pairs in 87.9 ms