RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeastyeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKG1YKR100C YPL225WQ08971 146 aaKnown RBP1.02□□□□□ -2.25
SKG1YKR100C COX19Q3E731 98 aa1.02□□□□□ -2.25
SKG1YKR100C YBL044WP38194 122 aa1.01□□□□□ -2.25
SKG1YKR100C RUB1Q03919 77 aa1.01□□□□□ -2.25
SKG1YKR100C YLR363W-AQ3E747 85 aa1.01□□□□□ -2.25
SKG1YKR100C YNR034W-AQ3E841 98 aa0.98□□□□□ -2.25
SKG1YKR100C HUR1P45820 110 aa0.97□□□□□ -2.25
SKG1YKR100C GCV3P39726 170 aaPredicted RBP0.96□□□□□ -2.26
SKG1YKR100C RSM19P53733 91 aaPredicted RBP0.95□□□□□ -2.26
SKG1YKR100C MIC10Q96VH5 97 aa0.93□□□□□ -2.26
SKG1YKR100C VMA21P41806 77 aa0.92□□□□□ -2.26
SKG1YKR100C LSM6Q06406 86 aaKnown RBP0.92□□□□□ -2.26
SKG1YKR100C PAU23Q07987 124 aa0.91□□□□□ -2.26
SKG1YKR100C YMR103CQ04436 120 aa0.9□□□□□ -2.27
SKG1YKR100C YDL022C-AP0C5L6 82 aa0.88□□□□□ -2.27
SKG1YKR100C NHP2P32495 156 aaPredicted RBP0.86□□□□□ -2.27
SKG1YKR100C SRB6P32570 121 aa0.81□□□□□ -2.28
SKG1YKR100C YGL194C-AQ2V2P6 80 aa0.81□□□□□ -2.28
SKG1YKR100C YBR072C-AQ3E794 53 aa0.81□□□□□ -2.28
SKG1YKR100C YPL038W-AQ3E7B4 63 aa0.81□□□□□ -2.28
SKG1YKR100C YCR095W-AQ3E787 52 aa0.78□□□□□ -2.28
SKG1YKR100C MRX7P53869 86 aa0.73□□□□□ -2.29
SKG1YKR100C YOL164W-AQ3E7A5 60 aa0.73□□□□□ -2.29
SKG1YKR100C RPS30AP0CX33 63 aaKnown RBP0.72□□□□□ -2.29
SKG1YKR100C RPS30BP0CX34 63 aaKnown RBP0.72□□□□□ -2.29
SKG1YKR100C RPA12P32529 125 aaKnown RBP0.67□□□□□ -2.3
SKG1YKR100C YIL156W-BQ2V2P4 73 aa0.65□□□□□ -2.31
SKG1YKR100C ZEO1Q08245 113 aa0.61□□□□□ -2.31
SKG1YKR100C MSL1P40567 111 aaPredicted RBP0.59□□□□□ -2.31
SKG1YKR100C YFR009W-AP0C5M9 85 aa0.57□□□□□ -2.32
SKG1YKR100C YNL198CP40166 100 aa0.54□□□□□ -2.32
SKG1YKR100C OLI1P61829 76 aa0.54□□□□□ -2.32
SKG1YKR100C VMA9Q3E7B6 73 aa0.5□□□□□ -2.33
SKG1YKR100C YGR146C-AQ8TGT9 53 aa0.5□□□□□ -2.33
SKG1YKR100C RPL38P49167 78 aaKnown RBP0.48□□□□□ -2.33
SKG1YKR100C ATP18P81450 59 aa0.48□□□□□ -2.33
SKG1YKR100C YOR072W-BQ3E832 53 aa0.48□□□□□ -2.33
SKG1YKR100C YJR107C-AP0CT86 78 aa0.47□□□□□ -2.33
SKG1YKR100C YBR201C-AQ2V2Q3 67 aa0.46□□□□□ -2.34
SKG1YKR100C YHR050W-AQ05451 56 aa0.45□□□□□ -2.34
SKG1YKR100C YKL065W-AQ2V2P2 73 aa0.42□□□□□ -2.34
SKG1YKR100C TOM6P33448 61 aa0.39□□□□□ -2.35
SKG1YKR100C ATX1P38636 73 aa0.38□□□□□ -2.35
SKG1YKR100C YOR394C-AQ8TGJ0 55 aa0.37□□□□□ -2.35
SKG1YKR100C YIL134C-AQ45U18 67 aa0.34□□□□□ -2.36
SKG1YKR100C SDH6Q3E785 79 aa0.32□□□□□ -2.36
SKG1YKR100C NOP10Q6Q547 58 aaPredicted RBP0.3□□□□□ -2.36
SKG1YKR100C YCR085WP25650 117 aa0.24□□□□□ -2.37
SKG1YKR100C YDR381C-AQ3E6R5 114 aa0.24□□□□□ -2.37
SKG1YKR100C YOR314WQ12506 109 aa0.17□□□□□ -2.38
SKG1YKR100C YCR108CQ3E819 63 aa0.16□□□□□ -2.38
SKG1YKR100C YDR246W-AQ3E763 66 aa0.05□□□□□ -2.4
SKG1YKR100C YDR119W-AQ2V2P9 66 aa0.03□□□□□ -2.4
SKG1YKR100C SSS1P35179 80 aa0.01□□□□□ -2.41
SKG1YKR100C ATP17Q06405 101 aa0.01□□□□□ -2.41
SKG1YKR100C PAI3P01094 68 aa-0.01□□□□□ -2.41
SKG1YKR100C YDR182W-AQ3E796 67 aa-0.16□□□□□ -2.44
SKG1YKR100C YMR001C-AQ8TGS9 76 aa-0.18□□□□□ -2.44
SKG1YKR100C YFL041W-AQ3E817 63 aa-0.21□□□□□ -2.44
SKG1YKR100C HUB1Q6Q546 73 aa-0.26□□□□□ -2.45
SKG1YKR100C YSY6P38374 65 aa-0.4□□□□□ -2.47
SKG1YKR100C YIL102C-AQ2V2P5 75 aa-0.44□□□□□ -2.48
SKG1YKR100C YOL166W-AQ8TGJ1 51 aa-0.48□□□□□ -2.49
Retrieved 63 of 5,963 RNA–protein pairs in 10.7 ms