RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W BSC4P53841 131 aa4.26□□□□□ -1.73
GEF1YJR040W YAR064WP39563 99 aa4.24□□□□□ -1.73
GEF1YJR040W DDR2P89113 61 aa4.24□□□□□ -1.73
GEF1YJR040W YBR027CP38220 110 aa4.22□□□□□ -1.73
GEF1YJR040W YOR072WQ08486 104 aa4.22□□□□□ -1.73
GEF1YJR040W YGL041C-BQ3E750 60 aa4.22□□□□□ -1.73
GEF1YJR040W GIS2P53849 153 aaKnown RBP RIP-Chip data4.21□□□□□ -1.74 RIP-Chip
GEF1YJR040W LCL2Q08045 131 aa4.2□□□□□ -1.74
GEF1YJR040W ATP17Q06405 101 aa4.2□□□□□ -1.74
GEF1YJR040W YGL149WP53116 101 aa4.19□□□□□ -1.74
GEF1YJR040W YMR230W-AQ3E7B5 62 aa4.18□□□□□ -1.74
GEF1YJR040W MRX7P53869 86 aa4.18□□□□□ -1.74
GEF1YJR040W YNL122CP53921 115 aaPredicted RBP4.18□□□□□ -1.74
GEF1YJR040W QCR10P37299 77 aa4.16□□□□□ -1.74
GEF1YJR040W YCR043CP25361 127 aa4.15□□□□□ -1.74
GEF1YJR040W YPR195CQ06594 109 aa4.15□□□□□ -1.74
GEF1YJR040W YDR034C-AP0C289 58 aa4.15□□□□□ -1.75
GEF1YJR040W YJL197C-AP0C5P0 93 aa4.15□□□□□ -1.75
GEF1YJR040W YFR032C-BQ8TGU2 87 aa4.14□□□□□ -1.75
GEF1YJR040W YDL012CQ12489 107 aa4.11□□□□□ -1.75
GEF1YJR040W SOM1Q05676 74 aa4.07□□□□□ -1.76
GEF1YJR040W LCL1Q02786 101 aa4.06□□□□□ -1.76
GEF1YJR040W YJR128WP47162 119 aa4.05□□□□□ -1.76
GEF1YJR040W MDN1Q12019 4910 aaKnown RBP4.03□□□□□ -1.76
GEF1YJR040W YGL014C-AP0C5N1 53 aa4.03□□□□□ -1.76
GEF1YJR040W FYV12Q08559 129 aa4.03□□□□□ -1.77
GEF1YJR040W YBR201C-AQ2V2Q3 67 aa4.01□□□□□ -1.77
GEF1YJR040W YOL097W-AQ3E7Y9 61 aa4□□□□□ -1.77
GEF1YJR040W YBL008W-AQ3E821 79 aa3.99□□□□□ -1.77
GEF1YJR040W YLR255CO13574 117 aa3.99□□□□□ -1.77
GEF1YJR040W YGR146C-AQ8TGT9 53 aa3.98□□□□□ -1.77
GEF1YJR040W YJR085CP47131 105 aaKnown RBP3.98□□□□□ -1.77
GEF1YJR040W COX8P04039 78 aa3.93□□□□□ -1.78
GEF1YJR040W YOR316C-AQ3E806 69 aa3.89□□□□□ -1.79
GEF1YJR040W YEL014CP39999 101 aa3.88□□□□□ -1.79
GEF1YJR040W YHR073W-AP0C5N7 58 aa3.88□□□□□ -1.79
GEF1YJR040W RPL37BP51402 88 aaKnown RBP3.86□□□□□ -1.79
GEF1YJR040W OLI1P61829 76 aa3.84□□□□□ -1.79
GEF1YJR040W YDR210WQ03482 75 aa3.83□□□□□ -1.8
GEF1YJR040W YBR016WP38216 128 aa3.81□□□□□ -1.8
GEF1YJR040W YFL067WP43537 175 aa3.81□□□□□ -1.8
GEF1YJR040W YJL144WP47009 104 aa3.8□□□□□ -1.8
GEF1YJR040W YCR108CQ3E819 63 aa3.8□□□□□ -1.8
GEF1YJR040W YOR394C-AQ8TGJ0 55 aa3.79□□□□□ -1.8
GEF1YJR040W YBL044WP38194 122 aa3.76□□□□□ -1.81
GEF1YJR040W COX7P10174 60 aa3.72□□□□□ -1.81
GEF1YJR040W CMC4Q3E7A9 73 aa3.7□□□□□ -1.82
GEF1YJR040W YER078W-AQ3E7A2 54 aa3.69□□□□□ -1.82
GEF1YJR040W YAL067W-AQ8TGK6 75 aa3.52□□□□□ -1.85
GEF1YJR040W RPL37AP49166 88 aaKnown RBP3.48□□□□□ -1.85
GEF1YJR040W YHR032W-AP0C5N6 59 aa3.42□□□□□ -1.86
GEF1YJR040W HHY1P39982 102 aa3.42□□□□□ -1.86
GEF1YJR040W Q0017Q9ZZX8 53 aa3.41□□□□□ -1.86
GEF1YJR040W YBR072C-AQ3E794 53 aa3.39□□□□□ -1.87
GEF1YJR040W YOR072W-BQ3E832 53 aa3.37□□□□□ -1.87
GEF1YJR040W YJL009WP47078 108 aa3.34□□□□□ -1.87
GEF1YJR040W YML054C-AQ3E809 52 aa3.27□□□□□ -1.89
GEF1YJR040W YOL164W-AQ3E7A5 60 aa2.94□□□□□ -1.94
GEF1YJR040W RPS29BP41058 56 aaKnown RBP2.82□□□□□ -1.96
GEF1YJR040W YHR086W-AQ3E746 53 aa2.76□□□□□ -1.97
GEF1YJR040W RPS29AP41057 56 aaKnown RBP2.73□□□□□ -1.97
GEF1YJR040W YHR050W-AQ05451 56 aa2.63□□□□□ -1.99
GEF1YJR040W YLR157W-EP0CF00 54 aa2.43□□□□□ -2.02
Retrieved 63 of 5,963 RNA–protein pairs in 66.4 ms