RNA–Protein interactions for RNA: YIL143C

SSL2, Transcript of Component of RNA polymerase transcription factor TFIIH holoenzyme, yeastyeast

Gene SSL2, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL2YIL143C YBR027CP38220 110 aa5.71□□□□□ -1.5
SSL2YIL143C YKL065W-AQ2V2P2 73 aa5.71□□□□□ -1.5
SSL2YIL143C YHR125WP38831 101 aa5.7□□□□□ -1.5
SSL2YIL143C YPR153WQ06537 140 aa5.69□□□□□ -1.5
SSL2YIL143C OST5Q92316 86 aa5.69□□□□□ -1.5
SSL2YIL143C HHF1P02309 103 aaKnown RBP5.68□□□□□ -1.5
SSL2YIL143C YLR157W-DP0CE99 70 aa5.68□□□□□ -1.5
SSL2YIL143C YJR085CP47131 105 aaKnown RBP5.68□□□□□ -1.5
SSL2YIL143C SDH6Q3E785 79 aa5.68□□□□□ -1.5
SSL2YIL143C DYN1P36022 4092 aa5.68□□□□□ -1.5
SSL2YIL143C YER188C-AP0C0V2 99 aa5.68□□□□□ -1.5
SSL2YIL143C SPG1P50088 95 aa5.67□□□□□ -1.5
SSL2YIL143C QCR10P37299 77 aa5.67□□□□□ -1.5
SSL2YIL143C YDL012CQ12489 107 aa5.65□□□□□ -1.5
SSL2YIL143C SOM1Q05676 74 aa5.64□□□□□ -1.51
SSL2YIL143C YMR001C-AQ8TGS9 76 aa5.64□□□□□ -1.51
SSL2YIL143C HUB1Q6Q546 73 aa5.62□□□□□ -1.51
SSL2YIL143C YOL097W-AQ3E7Y9 61 aa5.6□□□□□ -1.51
SSL2YIL143C YER078W-AQ3E7A2 54 aa5.59□□□□□ -1.51
SSL2YIL143C YCR095W-AQ3E787 52 aa5.57□□□□□ -1.52
SSL2YIL143C LCL2Q08045 131 aa5.55□□□□□ -1.52
SSL2YIL143C YJR128WP47162 119 aa5.53□□□□□ -1.52
SSL2YIL143C YGL149WP53116 101 aa5.49□□□□□ -1.53
SSL2YIL143C YIL156W-BQ2V2P4 73 aa5.47□□□□□ -1.53
SSL2YIL143C YNL122CP53921 115 aaPredicted RBP5.46□□□□□ -1.54
SSL2YIL143C LCL1Q02786 101 aa5.45□□□□□ -1.54
SSL2YIL143C YHR073W-AP0C5N7 58 aa5.43□□□□□ -1.54
SSL2YIL143C YGR146C-AQ8TGT9 53 aa5.43□□□□□ -1.54
SSL2YIL143C YLR255CO13574 117 aa5.41□□□□□ -1.54
SSL2YIL143C CMC4Q3E7A9 73 aa5.41□□□□□ -1.54
SSL2YIL143C YOR316C-AQ3E806 69 aa5.41□□□□□ -1.54
SSL2YIL143C YHR032W-AP0C5N6 59 aa5.4□□□□□ -1.55
SSL2YIL143C YBR201C-AQ2V2Q3 67 aa5.39□□□□□ -1.55
SSL2YIL143C ATP17Q06405 101 aa5.38□□□□□ -1.55
SSL2YIL143C COX8P04039 78 aa5.37□□□□□ -1.55
SSL2YIL143C YAL067W-AQ8TGK6 75 aa5.36□□□□□ -1.55
SSL2YIL143C YJL144WP47009 104 aa5.28□□□□□ -1.56
SSL2YIL143C OLI1P61829 76 aa5.27□□□□□ -1.57
SSL2YIL143C YBR016WP38216 128 aa5.24□□□□□ -1.57
SSL2YIL143C MRX7P53869 86 aa5.24□□□□□ -1.57
SSL2YIL143C COX7P10174 60 aa5.19□□□□□ -1.58
SSL2YIL143C RPL37BP51402 88 aaKnown RBP5.19□□□□□ -1.58
SSL2YIL143C YFL067WP43537 175 aa5.18□□□□□ -1.58
SSL2YIL143C YEL014CP39999 101 aa5.17□□□□□ -1.58
SSL2YIL143C YGL014C-AP0C5N1 53 aa5.08□□□□□ -1.6
SSL2YIL143C YCR108CQ3E819 63 aa5□□□□□ -1.61
SSL2YIL143C YDR210WQ03482 75 aa4.98□□□□□ -1.61
SSL2YIL143C YBL044WP38194 122 aa4.97□□□□□ -1.61
SSL2YIL143C YOR394C-AQ8TGJ0 55 aa4.9□□□□□ -1.63
SSL2YIL143C MDN1Q12019 4910 aaKnown RBP4.72□□□□□ -1.65
SSL2YIL143C RPL37AP49166 88 aaKnown RBP4.7□□□□□ -1.66
SSL2YIL143C YJL009WP47078 108 aa4.64□□□□□ -1.67
SSL2YIL143C Q0017Q9ZZX8 53 aa4.61□□□□□ -1.67
SSL2YIL143C YML054C-AQ3E809 52 aa4.57□□□□□ -1.68
SSL2YIL143C YOR072W-BQ3E832 53 aa4.55□□□□□ -1.68
SSL2YIL143C HHY1P39982 102 aa4.51□□□□□ -1.69
SSL2YIL143C YBR072C-AQ3E794 53 aa4.42□□□□□ -1.7
SSL2YIL143C YHR086W-AQ3E746 53 aa4.22□□□□□ -1.73
SSL2YIL143C YOL164W-AQ3E7A5 60 aa3.7□□□□□ -1.82
SSL2YIL143C YHR050W-AQ05451 56 aa3.62□□□□□ -1.83
SSL2YIL143C YLR157W-EP0CF00 54 aa3.46□□□□□ -1.86
SSL2YIL143C RPS29BP41058 56 aaKnown RBP3.45□□□□□ -1.86
SSL2YIL143C RPS29AP41057 56 aaKnown RBP3.21□□□□□ -1.9
Retrieved 63 of 5,963 RNA–protein pairs in 7.2 ms