RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C NHP2P32495 156 aaPredicted RBP1.53□□□□□ -2.16
SDS3YIL084C YGR164WP53291 111 aa1.53□□□□□ -2.16
SDS3YIL084C ATP18P81450 59 aa1.53□□□□□ -2.16
SDS3YIL084C YBR016WP38216 128 aa1.52□□□□□ -2.17
SDS3YIL084C YLR296WQ05898 108 aa1.52□□□□□ -2.17
SDS3YIL084C NAT5Q08689 176 aa1.52□□□□□ -2.17
SDS3YIL084C YEL014CP39999 101 aa1.51□□□□□ -2.17
SDS3YIL084C RPL38P49167 78 aaKnown RBP1.49□□□□□ -2.17
SDS3YIL084C YPR203WQ08994 102 aa1.49□□□□□ -2.17
SDS3YIL084C RPL36AP05745 100 aaPredicted RBP1.48□□□□□ -2.17
SDS3YIL084C COX23P38824 151 aa1.48□□□□□ -2.17
SDS3YIL084C LSM6Q06406 86 aaKnown RBP1.48□□□□□ -2.17
SDS3YIL084C OST5Q92316 86 aa1.48□□□□□ -2.17
SDS3YIL084C PAI3P01094 68 aa1.47□□□□□ -2.17
SDS3YIL084C YAR064WP39563 99 aa1.47□□□□□ -2.17
SDS3YIL084C YLR363W-AQ3E747 85 aa1.47□□□□□ -2.17
SDS3YIL084C YBL044WP38194 122 aa1.44□□□□□ -2.18
SDS3YIL084C YML054C-AQ3E809 52 aa1.44□□□□□ -2.18
SDS3YIL084C YDR381C-AQ3E6R5 114 aa1.43□□□□□ -2.18
SDS3YIL084C RPS30AP0CX33 63 aaKnown RBP1.42□□□□□ -2.18
SDS3YIL084C RPS30BP0CX34 63 aaKnown RBP1.42□□□□□ -2.18
SDS3YIL084C YCR085WP25650 117 aa1.42□□□□□ -2.18
SDS3YIL084C ATX1P38636 73 aa1.42□□□□□ -2.18
SDS3YIL084C YCR095W-AQ3E787 52 aa1.42□□□□□ -2.18
SDS3YIL084C YGL014C-AP0C5N1 53 aa1.41□□□□□ -2.18
SDS3YIL084C RPA12P32529 125 aaKnown RBP1.41□□□□□ -2.18
SDS3YIL084C YLR285C-AQ3E771 56 aa1.41□□□□□ -2.18
SDS3YIL084C YIL102CP40488 101 aa1.4□□□□□ -2.19
SDS3YIL084C TOM6P33448 61 aa1.39□□□□□ -2.19
SDS3YIL084C YMR122CQ03879 124 aa1.39□□□□□ -2.19
SDS3YIL084C YIL102C-AQ2V2P5 75 aa1.39□□□□□ -2.19
SDS3YIL084C YER188C-AP0C0V2 99 aa1.38□□□□□ -2.19
SDS3YIL084C AIM4P38305 123 aaPredicted RBP1.38□□□□□ -2.19
SDS3YIL084C YLR255CO13574 117 aa1.37□□□□□ -2.19
SDS3YIL084C YNL198CP40166 100 aa1.36□□□□□ -2.19
SDS3YIL084C YIL156W-BQ2V2P4 73 aa1.36□□□□□ -2.19
SDS3YIL084C YPL038W-AQ3E7B4 63 aa1.36□□□□□ -2.19
SDS3YIL084C OLI1P61829 76 aa1.33□□□□□ -2.2
SDS3YIL084C YDR119W-AQ2V2P9 66 aa1.33□□□□□ -2.2
SDS3YIL084C YKL065W-AQ2V2P2 73 aa1.32□□□□□ -2.2
SDS3YIL084C YFL041W-AQ3E817 63 aa1.32□□□□□ -2.2
SDS3YIL084C YGR146C-AQ8TGT9 53 aa1.32□□□□□ -2.2
SDS3YIL084C MRX7P53869 86 aa1.31□□□□□ -2.2
SDS3YIL084C YOR314WQ12506 109 aa1.31□□□□□ -2.2
SDS3YIL084C YSY6P38374 65 aa1.27□□□□□ -2.21
SDS3YIL084C NOP10Q6Q547 58 aaPredicted RBP1.27□□□□□ -2.21
SDS3YIL084C YOL013W-AP0C272 63 aaPredicted RBP1.26□□□□□ -2.21
SDS3YIL084C YBR201C-AQ2V2Q3 67 aa1.24□□□□□ -2.21
SDS3YIL084C YDR246W-AQ3E763 66 aa1.21□□□□□ -2.22
SDS3YIL084C SDH6Q3E785 79 aa1.21□□□□□ -2.22
SDS3YIL084C HUB1Q6Q546 73 aa1.21□□□□□ -2.22
SDS3YIL084C ATP17Q06405 101 aa1.2□□□□□ -2.22
SDS3YIL084C HHY1P39982 102 aa1.19□□□□□ -2.22
SDS3YIL084C YOL166W-AQ8TGJ1 51 aa1.19□□□□□ -2.22
SDS3YIL084C YDR182W-AQ3E796 67 aa1.17□□□□□ -2.22
SDS3YIL084C YOR394C-AQ8TGJ0 55 aa1.17□□□□□ -2.22
SDS3YIL084C YBR072C-AQ3E794 53 aa1.15□□□□□ -2.23
SDS3YIL084C YMR001C-AQ8TGS9 76 aa1.11□□□□□ -2.23
SDS3YIL084C YOL164W-AQ3E7A5 60 aa1.07□□□□□ -2.24
SDS3YIL084C YOR072W-BQ3E832 53 aa1.04□□□□□ -2.24
SDS3YIL084C YLR157W-EP0CF00 54 aa1.03□□□□□ -2.24
SDS3YIL084C YCR108CQ3E819 63 aa0.98□□□□□ -2.25
SDS3YIL084C YHR050W-AQ05451 56 aa0.85□□□□□ -2.27
Retrieved 63 of 5,963 RNA–protein pairs in 35 ms