RNA–Protein interactions for RNA: YHR100C

GEP4, Transcript of Mitochondrial phosphatidylglycerophosphatase (PGP phosphatase), yeastyeast

Gene GEP4, Length 558 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEP4YHR100C YCL042WP25572 119 aa2.29□□□□□ -2.04
GEP4YHR100C YLR307C-AQ3E825 87 aa2.29□□□□□ -2.04
GEP4YHR100C RDS3Q06835 107 aaPredicted RBP2.28□□□□□ -2.04
GEP4YHR100C YDR524C-BQ3E6R4 66 aa2.28□□□□□ -2.04
GEP4YHR100C YOR394C-AQ8TGJ0 55 aa2.28□□□□□ -2.04
GEP4YHR100C RPL29P05747 59 aaPredicted RBP2.27□□□□□ -2.05
GEP4YHR100C LCL1Q02786 101 aa2.27□□□□□ -2.05
GEP4YHR100C YAR064WP39563 99 aa2.26□□□□□ -2.05
GEP4YHR100C YJR128WP47162 119 aa2.26□□□□□ -2.05
GEP4YHR100C OLI1P61829 76 aa2.26□□□□□ -2.05
GEP4YHR100C TRA1P38811 3744 aa2.25□□□□□ -2.05
GEP4YHR100C CSF1Q12150 2958 aa2.25□□□□□ -2.05
GEP4YHR100C DDR2P89113 61 aa2.24□□□□□ -2.05
GEP4YHR100C NCE101Q02820 53 aa2.23□□□□□ -2.05
GEP4YHR100C BLM10P43583 2143 aa2.23□□□□□ -2.05
GEP4YHR100C ACC1Q00955 2233 aaKnown RBP2.21□□□□□ -2.06
GEP4YHR100C YNL146C-AQ3E7Z1 64 aa2.21□□□□□ -2.06
GEP4YHR100C GIS2P53849 153 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
GEP4YHR100C YJL127C-BQ3E828 52 aa2.2□□□□□ -2.06
GEP4YHR100C BEM2P39960 2167 aaKnown RBP2.19□□□□□ -2.06
GEP4YHR100C RPS27AP35997 82 aaKnown RBP2.18□□□□□ -2.06
GEP4YHR100C YGL260WP53056 76 aa2.17□□□□□ -2.06
GEP4YHR100C PMP3P87284 55 aa2.17□□□□□ -2.06
GEP4YHR100C SEC16P48415 2195 aaKnown RBP2.17□□□□□ -2.06
GEP4YHR100C RPC10P40422 70 aa2.16□□□□□ -2.06
GEP4YHR100C YGR146C-AQ8TGT9 53 aa2.15□□□□□ -2.07
GEP4YHR100C RPL43AP0CX25 92 aaKnown RBP2.14□□□□□ -2.07
GEP4YHR100C RPL43BP0CX26 92 aa2.14□□□□□ -2.07
GEP4YHR100C YBL044WP38194 122 aa2.14□□□□□ -2.07
GEP4YHR100C YMR230W-AQ3E7B5 62 aa2.14□□□□□ -2.07
GEP4YHR100C RPS27BP38711 82 aa2.13□□□□□ -2.07
GEP4YHR100C RPL37BP51402 88 aaKnown RBP2.13□□□□□ -2.07
GEP4YHR100C YCR108CQ3E819 63 aa2.13□□□□□ -2.07
GEP4YHR100C YBR072C-AQ3E794 53 aa2.12□□□□□ -2.07
GEP4YHR100C HOR7Q05827 59 aa2.11□□□□□ -2.07
GEP4YHR100C MEC1P38111 2368 aa2.09□□□□□ -2.07
GEP4YHR100C HHY1P39982 102 aa2.09□□□□□ -2.07
GEP4YHR100C YBR016WP38216 128 aa2.07□□□□□ -2.08
GEP4YHR100C YOR316C-AQ3E806 69 aa2.07□□□□□ -2.08
GEP4YHR100C POL2P21951 2222 aaKnown RBP2.06□□□□□ -2.08
GEP4YHR100C YHR212W-AP0CX91 67 aa2.05□□□□□ -2.08
GEP4YHR100C URA2P07259 2214 aaKnown RBP2.03□□□□□ -2.08
GEP4YHR100C YHR086W-AQ3E746 53 aa2.03□□□□□ -2.08
GEP4YHR100C YMR105W-AQ8TGS8 64 aa2.02□□□□□ -2.09
GEP4YHR100C YHR073W-AP0C5N7 58 aa2.01□□□□□ -2.09
GEP4YHR100C HFA1P32874 2273 aa2□□□□□ -2.09
GEP4YHR100C YIL046W-AQ3E7Z4 54 aa2□□□□□ -2.09
GEP4YHR100C DYN1P36022 4092 aa1.99□□□□□ -2.09
GEP4YHR100C RPL39P04650 51 aa1.96□□□□□ -2.1
GEP4YHR100C YOR072W-BQ3E832 53 aa1.95□□□□□ -2.1
GEP4YHR100C YBR056W-AI2HB52 66 aa1.94□□□□□ -2.1
GEP4YHR100C RPL37AP49166 88 aaKnown RBP1.92□□□□□ -2.1
GEP4YHR100C MDN1Q12019 4910 aaKnown RBP1.9□□□□□ -2.11
GEP4YHR100C YDR034C-AP0C289 58 aa1.89□□□□□ -2.11
GEP4YHR100C YOL164W-AQ3E7A5 60 aa1.84□□□□□ -2.11
GEP4YHR100C YLL066W-BQ8TGJ7 56 aa1.77□□□□□ -2.13
GEP4YHR100C YLR157W-EP0CF00 54 aa1.75□□□□□ -2.13
GEP4YHR100C Q0297Q9ZZV8 51 aa1.68□□□□□ -2.14
GEP4YHR100C YML054C-AQ3E809 52 aa1.65□□□□□ -2.15
GEP4YHR100C Q0017Q9ZZX8 53 aa1.55□□□□□ -2.16
GEP4YHR100C RPS29BP41058 56 aaKnown RBP1.53□□□□□ -2.16
GEP4YHR100C RPS29AP41057 56 aaKnown RBP1.52□□□□□ -2.17
GEP4YHR100C YHR050W-AQ05451 56 aa1.5□□□□□ -2.17
Retrieved 63 of 5,963 RNA–protein pairs in 86.3 ms