RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C IRA1P18963 3092 aa1.69□□□□□ -2.14
SWC4YGR002C YCL042WP25572 119 aa1.68□□□□□ -2.14
SWC4YGR002C LCL1Q02786 101 aa1.68□□□□□ -2.14
SWC4YGR002C YOR394C-AQ8TGJ0 55 aa1.68□□□□□ -2.14
SWC4YGR002C AUA1P32450 94 aa1.67□□□□□ -2.14
SWC4YGR002C YHR213W-BQ8TGK1 99 aa1.67□□□□□ -2.14
SWC4YGR002C MDN1Q12019 4910 aaKnown RBP1.67□□□□□ -2.14
SWC4YGR002C YAR064WP39563 99 aa1.66□□□□□ -2.14
SWC4YGR002C YJR128WP47162 119 aa1.66□□□□□ -2.14
SWC4YGR002C YBR072C-AQ3E794 53 aa1.66□□□□□ -2.14
SWC4YGR002C YJL133C-AQ3E7A3 74 aa1.66□□□□□ -2.14
SWC4YGR002C RPL29P05747 59 aaPredicted RBP1.64□□□□□ -2.15
SWC4YGR002C DDR2P89113 61 aa1.64□□□□□ -2.15
SWC4YGR002C YHR086W-AQ3E746 53 aa1.64□□□□□ -2.15
SWC4YGR002C YLL006W-AQ3E814 58 aa1.64□□□□□ -2.15
SWC4YGR002C SEC16P48415 2195 aaKnown RBP1.63□□□□□ -2.15
SWC4YGR002C HHY1P39982 102 aa1.62□□□□□ -2.15
SWC4YGR002C HUA1P40325 198 aa1.62□□□□□ -2.15
SWC4YGR002C BLM10P43583 2143 aa1.61□□□□□ -2.15
SWC4YGR002C RPC10P40422 70 aa1.58□□□□□ -2.16
SWC4YGR002C YHR212W-AP0CX91 67 aa1.57□□□□□ -2.16
SWC4YGR002C RPS27AP35997 82 aaKnown RBP1.57□□□□□ -2.16
SWC4YGR002C YJL127C-BQ3E828 52 aa1.57□□□□□ -2.16
SWC4YGR002C ACC1Q00955 2233 aaKnown RBP1.57□□□□□ -2.16
SWC4YGR002C YBL044WP38194 122 aa1.57□□□□□ -2.16
SWC4YGR002C NCE101Q02820 53 aa1.57□□□□□ -2.16
SWC4YGR002C YGR146C-AQ8TGT9 53 aa1.57□□□□□ -2.16
SWC4YGR002C PMP3P87284 55 aa1.56□□□□□ -2.16
SWC4YGR002C YDR034W-BQ6Q5X2 51 aa1.55□□□□□ -2.16
SWC4YGR002C BEM2P39960 2167 aaKnown RBP1.55□□□□□ -2.16
SWC4YGR002C RPS27BP38711 82 aa1.54□□□□□ -2.16
SWC4YGR002C HOR7Q05827 59 aa1.54□□□□□ -2.16
SWC4YGR002C YOR316C-AQ3E806 69 aa1.54□□□□□ -2.16
SWC4YGR002C YCR108CQ3E819 63 aa1.53□□□□□ -2.16
SWC4YGR002C MEC1P38111 2368 aa1.53□□□□□ -2.16
SWC4YGR002C POL2P21951 2222 aaKnown RBP1.52□□□□□ -2.17
SWC4YGR002C RPL37BP51402 88 aaKnown RBP1.52□□□□□ -2.17
SWC4YGR002C YBR016WP38216 128 aa1.51□□□□□ -2.17
SWC4YGR002C CSF1Q12150 2958 aa1.5□□□□□ -2.17
SWC4YGR002C RPL43AP0CX25 92 aaKnown RBP1.49□□□□□ -2.17
SWC4YGR002C RPL43BP0CX26 92 aa1.49□□□□□ -2.17
SWC4YGR002C YDR524C-BQ3E6R4 66 aa1.49□□□□□ -2.17
SWC4YGR002C YOR072W-BQ3E832 53 aa1.49□□□□□ -2.17
SWC4YGR002C YHR073W-AP0C5N7 58 aa1.48□□□□□ -2.17
SWC4YGR002C HFA1P32874 2273 aa1.45□□□□□ -2.18
SWC4YGR002C URA2P07259 2214 aaKnown RBP1.43□□□□□ -2.18
SWC4YGR002C DYN1P36022 4092 aa1.42□□□□□ -2.18
SWC4YGR002C RPL37AP49166 88 aaKnown RBP1.41□□□□□ -2.18
SWC4YGR002C YDR034C-AP0C289 58 aa1.4□□□□□ -2.19
SWC4YGR002C YOL164W-AQ3E7A5 60 aa1.38□□□□□ -2.19
SWC4YGR002C YMR105W-AQ8TGS8 64 aa1.35□□□□□ -2.19
SWC4YGR002C YLR157W-EP0CF00 54 aa1.34□□□□□ -2.19
SWC4YGR002C TRA1P38811 3744 aa1.33□□□□□ -2.2
SWC4YGR002C RPL39P04650 51 aa1.31□□□□□ -2.2
SWC4YGR002C YML054C-AQ3E809 52 aa1.25□□□□□ -2.21
SWC4YGR002C RPS29BP41058 56 aaKnown RBP1.23□□□□□ -2.21
SWC4YGR002C RPS29AP41057 56 aaKnown RBP1.2□□□□□ -2.22
SWC4YGR002C YLL066W-BQ8TGJ7 56 aa1.2□□□□□ -2.22
SWC4YGR002C YIL046W-AQ3E7Z4 54 aa1.17□□□□□ -2.22
SWC4YGR002C Q0017Q9ZZX8 53 aa1.17□□□□□ -2.22
SWC4YGR002C YHR050W-AQ05451 56 aa1.16□□□□□ -2.22
SWC4YGR002C YBR056W-AI2HB52 66 aa1.11□□□□□ -2.23
SWC4YGR002C Q0297Q9ZZV8 51 aa0.93□□□□□ -2.26
Retrieved 63 of 5,963 RNA–protein pairs in 34.2 ms