RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W YOL166W-AQ8TGJ1 51 aa4.54□□□□□ -1.68
SHC1YER096W YER187WP40102 141 aa4.53□□□□□ -1.68
SHC1YER096W YNL122CP53921 115 aaPredicted RBP4.51□□□□□ -1.69
SHC1YER096W COX7P10174 60 aa4.51□□□□□ -1.69
SHC1YER096W AIM4P38305 123 aaPredicted RBP4.5□□□□□ -1.69
SHC1YER096W YOR316C-AQ3E806 69 aa4.5□□□□□ -1.69
SHC1YER096W YJR128WP47162 119 aa4.49□□□□□ -1.69
SHC1YER096W CMC4Q3E7A9 73 aa4.44□□□□□ -1.7
SHC1YER096W HHF1P02309 103 aaKnown RBP4.43□□□□□ -1.7
SHC1YER096W YDR182W-AQ3E796 67 aa4.43□□□□□ -1.7
SHC1YER096W YJL144WP47009 104 aa4.41□□□□□ -1.7
SHC1YER096W YHR125WP38831 101 aa4.41□□□□□ -1.7
SHC1YER096W RPL37BP51402 88 aaKnown RBP4.39□□□□□ -1.71
SHC1YER096W YLR255CO13574 117 aa4.38□□□□□ -1.71
SHC1YER096W RPS30AP0CX33 63 aaKnown RBP4.36□□□□□ -1.71
SHC1YER096W RPS30BP0CX34 63 aaKnown RBP4.36□□□□□ -1.71
SHC1YER096W YGR146C-AQ8TGT9 53 aa4.35□□□□□ -1.71
SHC1YER096W YKL065W-AQ2V2P2 73 aa4.32□□□□□ -1.72
SHC1YER096W YBR016WP38216 128 aa4.31□□□□□ -1.72
SHC1YER096W COX8P04039 78 aa4.29□□□□□ -1.72
SHC1YER096W YOR381W-AQ3E804 55 aa4.29□□□□□ -1.72
SHC1YER096W YOR376W-AQ3E805 51 aa4.28□□□□□ -1.72
SHC1YER096W YFR032C-BQ8TGU2 87 aa4.28□□□□□ -1.72
SHC1YER096W YBL008W-AQ3E821 79 aa4.27□□□□□ -1.73
SHC1YER096W YML100W-AQ8TGT0 57 aa4.27□□□□□ -1.73
SHC1YER096W SDH6Q3E785 79 aa4.26□□□□□ -1.73
SHC1YER096W YGL034CP53186 121 aa4.24□□□□□ -1.73
SHC1YER096W OST5Q92316 86 aa4.21□□□□□ -1.73
SHC1YER096W OLI1P61829 76 aa4.21□□□□□ -1.74
SHC1YER096W YMR122CQ03879 124 aa4.21□□□□□ -1.74
SHC1YER096W YER188C-AP0C0V2 99 aa4.2□□□□□ -1.74
SHC1YER096W YMR001C-AQ8TGS9 76 aa4.2□□□□□ -1.74
SHC1YER096W YIL156W-BQ2V2P4 73 aa4.16□□□□□ -1.74
SHC1YER096W YBR201C-AQ2V2Q3 67 aa4.16□□□□□ -1.74
SHC1YER096W YJL009WP47078 108 aa4.14□□□□□ -1.75
SHC1YER096W FYV12Q08559 129 aa4.14□□□□□ -1.75
SHC1YER096W Q0017Q9ZZX8 53 aa4.12□□□□□ -1.75
SHC1YER096W HUB1Q6Q546 73 aa4.11□□□□□ -1.75
SHC1YER096W MRX7P53869 86 aa4.1□□□□□ -1.75
SHC1YER096W QCR10P37299 77 aa4.06□□□□□ -1.76
SHC1YER096W YCR095W-AQ3E787 52 aa4.04□□□□□ -1.76
SHC1YER096W YBL044WP38194 122 aa4□□□□□ -1.77
SHC1YER096W YDR210WQ03482 75 aa4□□□□□ -1.77
SHC1YER096W SOM1Q05676 74 aa3.99□□□□□ -1.77
SHC1YER096W YER078W-AQ3E7A2 54 aa3.97□□□□□ -1.77
SHC1YER096W ATP17Q06405 101 aa3.94□□□□□ -1.78
SHC1YER096W YML054C-AQ3E809 52 aa3.88□□□□□ -1.79
SHC1YER096W YOR394C-AQ8TGJ0 55 aa3.88□□□□□ -1.79
SHC1YER096W YCR108CQ3E819 63 aa3.79□□□□□ -1.8
SHC1YER096W YGL014C-AP0C5N1 53 aa3.78□□□□□ -1.8
SHC1YER096W YEL014CP39999 101 aa3.71□□□□□ -1.82
SHC1YER096W RPL37AP49166 88 aaKnown RBP3.7□□□□□ -1.82
SHC1YER096W YAL067W-AQ8TGK6 75 aa3.54□□□□□ -1.84
SHC1YER096W YOR072W-BQ3E832 53 aa3.49□□□□□ -1.85
SHC1YER096W YHR032W-AP0C5N6 59 aa3.45□□□□□ -1.86
SHC1YER096W RPS29BP41058 56 aaKnown RBP3.36□□□□□ -1.87
SHC1YER096W HHY1P39982 102 aa3.34□□□□□ -1.88
SHC1YER096W RPS29AP41057 56 aaKnown RBP3.24□□□□□ -1.89
SHC1YER096W YBR072C-AQ3E794 53 aa3.22□□□□□ -1.89
SHC1YER096W YHR050W-AQ05451 56 aa2.84□□□□□ -1.95
SHC1YER096W YOL164W-AQ3E7A5 60 aa2.73□□□□□ -1.97
SHC1YER096W YHR086W-AQ3E746 53 aa2.72□□□□□ -1.97
SHC1YER096W YLR157W-EP0CF00 54 aa2.41□□□□□ -2.02
Retrieved 63 of 5,963 RNA–protein pairs in 9.6 ms