RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	NHP2	P32495	156 aa	Predicted RBP	0.65	□□□□□ -2.3
DOT6	YER088C	SRB6	P32570	121 aa		0.65	□□□□□ -2.3
DOT6	YER088C	COX23	P38824	151 aa		0.65	□□□□□ -2.3
DOT6	YER088C	HHY1	P39982	102 aa		0.65	□□□□□ -2.3
DOT6	YER088C	RSM18	P40033	138 aa		0.65	□□□□□ -2.3
DOT6	YER088C	PAU23	Q07987	124 aa		0.65	□□□□□ -2.31
DOT6	YER088C	YBR016W	P38216	128 aa		0.64	□□□□□ -2.31
DOT6	YER088C	RSM19	P53733	91 aa	Predicted RBP	0.64	□□□□□ -2.31
DOT6	YER088C	YLR285C-A	Q3E771	56 aa		0.63	□□□□□ -2.31
DOT6	YER088C	YLR255C	O13574	117 aa		0.62	□□□□□ -2.31
DOT6	YER088C	YML054C-A	Q3E809	52 aa		0.62	□□□□□ -2.31
DOT6	YER088C	EDC1	P53080	175 aa	Predicted RBP	0.61	□□□□□ -2.31
DOT6	YER088C	LSM6	Q06406	86 aa	Known RBP	0.61	□□□□□ -2.31
DOT6	YER088C	MIC10	Q96VH5	97 aa		0.61	□□□□□ -2.31
DOT6	YER088C	ZEO1	Q08245	113 aa		0.6	□□□□□ -2.31
DOT6	YER088C	YOR034C-A	Q3E735	80 aa		0.6	□□□□□ -2.31
DOT6	YER088C	YJL133C-A	Q3E7A3	74 aa		0.6	□□□□□ -2.31
DOT6	YER088C	YOR316C-A	Q3E806	69 aa		0.59	□□□□□ -2.31
DOT6	YER088C	YFR009W-A	P0C5M9	85 aa		0.57	□□□□□ -2.32
DOT6	YER088C	YJR107C-A	P0CT86	78 aa		0.57	□□□□□ -2.32
DOT6	YER088C	ATP18	P81450	59 aa		0.57	□□□□□ -2.32
DOT6	YER088C	YPL038W-A	Q3E7B4	63 aa		0.57	□□□□□ -2.32
DOT6	YER088C	YCR095W-A	Q3E787	52 aa		0.56	□□□□□ -2.32
DOT6	YER088C	MSL1	P40567	111 aa	Predicted RBP	0.55	□□□□□ -2.32
DOT6	YER088C	YLR157W-E	P0CF00	54 aa		0.55	□□□□□ -2.32
DOT6	YER088C	YBR072C-A	Q3E794	53 aa		0.55	□□□□□ -2.32
DOT6	YER088C	MRX7	P53869	86 aa		0.54	□□□□□ -2.32
DOT6	YER088C	YBL044W	P38194	122 aa		0.52	□□□□□ -2.33
DOT6	YER088C	YDR381C-A	Q3E6R5	114 aa		0.52	□□□□□ -2.33
DOT6	YER088C	PAI3	P01094	68 aa		0.51	□□□□□ -2.33
DOT6	YER088C	YIL134C-A	Q45U18	67 aa		0.51	□□□□□ -2.33
DOT6	YER088C	YGR146C-A	Q8TGT9	53 aa		0.51	□□□□□ -2.33
DOT6	YER088C	SSS1	P35179	80 aa		0.5	□□□□□ -2.33
DOT6	YER088C	YIL156W-B	Q2V2P4	73 aa		0.5	□□□□□ -2.33
DOT6	YER088C	RPS30A	P0CX33	63 aa	Known RBP	0.48	□□□□□ -2.33
DOT6	YER088C	RPS30B	P0CX34	63 aa	Known RBP	0.48	□□□□□ -2.33
DOT6	YER088C	RPA12	P32529	125 aa	Known RBP	0.48	□□□□□ -2.33
DOT6	YER088C	RPL38	P49167	78 aa	Known RBP	0.48	□□□□□ -2.33
DOT6	YER088C	OLI1	P61829	76 aa		0.48	□□□□□ -2.33
DOT6	YER088C	YKL065W-A	Q2V2P2	73 aa		0.48	□□□□□ -2.33
DOT6	YER088C	YOL164W-A	Q3E7A5	60 aa		0.46	□□□□□ -2.34
DOT6	YER088C	YIL102C-A	Q2V2P5	75 aa		0.45	□□□□□ -2.34
DOT6	YER088C	YOR394C-A	Q8TGJ0	55 aa		0.43	□□□□□ -2.34
DOT6	YER088C	YCR085W	P25650	117 aa		0.43	□□□□□ -2.34
DOT6	YER088C	YNL198C	P40166	100 aa		0.43	□□□□□ -2.34
DOT6	YER088C	TOM6	P33448	61 aa		0.42	□□□□□ -2.34
DOT6	YER088C	YFL041W-A	Q3E817	63 aa		0.42	□□□□□ -2.34
DOT6	YER088C	YSY6	P38374	65 aa		0.41	□□□□□ -2.34
DOT6	YER088C	ATX1	P38636	73 aa		0.41	□□□□□ -2.34
DOT6	YER088C	YBR201C-A	Q2V2Q3	67 aa		0.41	□□□□□ -2.34
DOT6	YER088C	YOR314W	Q12506	109 aa		0.39	□□□□□ -2.35
DOT6	YER088C	SDH6	Q3E785	79 aa		0.38	□□□□□ -2.35
DOT6	YER088C	YOR072W-B	Q3E832	53 aa		0.38	□□□□□ -2.35
DOT6	YER088C	ATP17	Q06405	101 aa		0.37	□□□□□ -2.35
DOT6	YER088C	NOP10	Q6Q547	58 aa	Predicted RBP	0.37	□□□□□ -2.35
DOT6	YER088C	YOL166W-A	Q8TGJ1	51 aa		0.37	□□□□□ -2.35
DOT6	YER088C	YDR119W-A	Q2V2P9	66 aa		0.35	□□□□□ -2.35
DOT6	YER088C	YDR182W-A	Q3E796	67 aa		0.35	□□□□□ -2.35
DOT6	YER088C	YHR050W-A	Q05451	56 aa		0.34	□□□□□ -2.36
DOT6	YER088C	HUB1	Q6Q546	73 aa		0.33	□□□□□ -2.36
DOT6	YER088C	YDR246W-A	Q3E763	66 aa		0.32	□□□□□ -2.36
DOT6	YER088C	YMR001C-A	Q8TGS9	76 aa		0.32	□□□□□ -2.36
DOT6	YER088C	YCR108C	Q3E819	63 aa		0.3	□□□□□ -2.36

Retrieved 63 of 5,963 RNA–protein pairs in 11.1 ms