RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W YLR363W-AQ3E747 85 aa0.99□□□□□ -2.25
VPS41YDR080W PBI2P0CT04 75 aaKnown RBP0.99□□□□□ -2.25
VPS41YDR080W YHL042WP38729 150 aa0.99□□□□□ -2.25
VPS41YDR080W SBH1P52870 82 aa0.99□□□□□ -2.25
VPS41YDR080W ATX1P38636 73 aa0.98□□□□□ -2.25
VPS41YDR080W YNL277W-AQ3E7Z0 62 aa0.97□□□□□ -2.25
VPS41YDR080W YNL198CP40166 100 aa0.97□□□□□ -2.25
VPS41YDR080W ATP20Q12233 115 aa0.97□□□□□ -2.25
VPS41YDR080W YGR146C-AQ8TGT9 53 aa0.96□□□□□ -2.26
VPS41YDR080W YCR085WP25650 117 aa0.96□□□□□ -2.26
VPS41YDR080W COX8P04039 78 aa0.96□□□□□ -2.26
VPS41YDR080W YLR412C-AQ3E742 68 aa0.96□□□□□ -2.26
VPS41YDR080W EMC6Q12431 108 aa0.95□□□□□ -2.26
VPS41YDR080W YIL102C-AQ2V2P5 75 aa0.95□□□□□ -2.26
VPS41YDR080W YIL156W-BQ2V2P4 73 aa0.94□□□□□ -2.26
VPS41YDR080W YOR376W-AQ3E805 51 aa0.94□□□□□ -2.26
VPS41YDR080W RPA12P32529 125 aaKnown RBP0.94□□□□□ -2.26
VPS41YDR080W YBL044WP38194 122 aa0.94□□□□□ -2.26
VPS41YDR080W OLI1P61829 76 aa0.94□□□□□ -2.26
VPS41YDR080W YDR119W-AQ2V2P9 66 aa0.94□□□□□ -2.26
VPS41YDR080W YFL041W-AQ3E817 63 aa0.93□□□□□ -2.26
VPS41YDR080W TOM6P33448 61 aa0.93□□□□□ -2.26
VPS41YDR080W RPL38P49167 78 aaKnown RBP0.93□□□□□ -2.26
VPS41YDR080W YKL065W-AQ2V2P2 73 aa0.91□□□□□ -2.26
VPS41YDR080W YPL038W-AQ3E7B4 63 aa0.91□□□□□ -2.26
VPS41YDR080W RPS30AP0CX33 63 aaKnown RBP0.91□□□□□ -2.26
VPS41YDR080W RPS30BP0CX34 63 aaKnown RBP0.91□□□□□ -2.26
VPS41YDR080W YML100W-AQ8TGT0 57 aa0.9□□□□□ -2.26
VPS41YDR080W YFR032C-BQ8TGU2 87 aa0.9□□□□□ -2.27
VPS41YDR080W YSY6P38374 65 aa0.89□□□□□ -2.27
VPS41YDR080W YOR381W-AQ3E804 55 aa0.89□□□□□ -2.27
VPS41YDR080W YOL013W-AP0C272 63 aaPredicted RBP0.88□□□□□ -2.27
VPS41YDR080W MRX7P53869 86 aa0.88□□□□□ -2.27
VPS41YDR080W YLR285C-AQ3E771 56 aa0.87□□□□□ -2.27
VPS41YDR080W OST5Q92316 86 aa0.87□□□□□ -2.27
VPS41YDR080W QCR10P37299 77 aa0.87□□□□□ -2.27
VPS41YDR080W YMR122CQ03879 124 aa0.87□□□□□ -2.27
VPS41YDR080W YER188C-AP0C0V2 99 aa0.86□□□□□ -2.27
VPS41YDR080W SOM1Q05676 74 aa0.86□□□□□ -2.27
VPS41YDR080W YOR314WQ12506 109 aa0.86□□□□□ -2.27
VPS41YDR080W YDR246W-AQ3E763 66 aa0.85□□□□□ -2.27
VPS41YDR080W NOP10Q6Q547 58 aaPredicted RBP0.85□□□□□ -2.27
VPS41YDR080W YCR095W-AQ3E787 52 aa0.84□□□□□ -2.27
VPS41YDR080W YOR394C-AQ8TGJ0 55 aa0.84□□□□□ -2.27
VPS41YDR080W YIL102CP40488 101 aa0.84□□□□□ -2.28
VPS41YDR080W YHR032W-AP0C5N6 59 aa0.83□□□□□ -2.28
VPS41YDR080W YHR125WP38831 101 aa0.83□□□□□ -2.28
VPS41YDR080W YDR182W-AQ3E796 67 aa0.82□□□□□ -2.28
VPS41YDR080W YOL166W-AQ8TGJ1 51 aa0.82□□□□□ -2.28
VPS41YDR080W YBR201C-AQ2V2Q3 67 aa0.81□□□□□ -2.28
VPS41YDR080W HUB1Q6Q546 73 aa0.81□□□□□ -2.28
VPS41YDR080W YMR001C-AQ8TGS9 76 aa0.79□□□□□ -2.28
VPS41YDR080W YEL014CP39999 101 aa0.78□□□□□ -2.28
VPS41YDR080W ATP17Q06405 101 aa0.78□□□□□ -2.28
VPS41YDR080W SDH6Q3E785 79 aa0.78□□□□□ -2.28
VPS41YDR080W YGL014C-AP0C5N1 53 aa0.78□□□□□ -2.28
VPS41YDR080W YOR072W-BQ3E832 53 aa0.76□□□□□ -2.29
VPS41YDR080W YCR108CQ3E819 63 aa0.7□□□□□ -2.3
VPS41YDR080W YHR050W-AQ05451 56 aa0.68□□□□□ -2.3
VPS41YDR080W HHY1P39982 102 aa0.65□□□□□ -2.31
VPS41YDR080W YBR072C-AQ3E794 53 aa0.64□□□□□ -2.31
VPS41YDR080W YOL164W-AQ3E7A5 60 aa0.6□□□□□ -2.31
VPS41YDR080W YLR157W-EP0CF00 54 aa0.54□□□□□ -2.32
Retrieved 63 of 5,963 RNA–protein pairs in 4.6 ms