RNA–Protein interactions for RNA: YDR007W

TRP1, Transcript of Phosphoribosylanthranilate isomerase, yeastyeast

Gene TRP1, Length 675 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRP1YDR007W YGL014C-AP0C5N1 53 aa3.63□□□□□ -1.83
TRP1YDR007W YOL097W-AQ3E7Y9 61 aa3.61□□□□□ -1.83
TRP1YDR007W Q0032Q9ZZX7 96 aa3.61□□□□□ -1.83
TRP1YDR007W HFA1P32874 2273 aa3.6□□□□□ -1.83
TRP1YDR007W IRA2P19158 3079 aa3.59□□□□□ -1.84
TRP1YDR007W YOR072WQ08486 104 aa3.58□□□□□ -1.84
TRP1YDR007W IRA1P18963 3092 aa3.57□□□□□ -1.84
TRP1YDR007W TOR1P35169 2470 aa3.57□□□□□ -1.84
TRP1YDR007W YHR007C-AQ07074 71 aa3.55□□□□□ -1.84
TRP1YDR007W YBR201C-AQ2V2Q3 67 aa3.54□□□□□ -1.84
TRP1YDR007W TAR1Q8TGM6 124 aa3.53□□□□□ -1.84
TRP1YDR007W COX8P04039 78 aa3.52□□□□□ -1.85
TRP1YDR007W RPL33AP05744 107 aaKnown RBP3.51□□□□□ -1.85
TRP1YDR007W YGL041C-BQ3E750 60 aa3.51□□□□□ -1.85
TRP1YDR007W YHR086W-AQ3E746 53 aa3.48□□□□□ -1.85
TRP1YDR007W GCN1P33892 2672 aaKnown RBP3.47□□□□□ -1.85
TRP1YDR007W CUP1-1P0CX80 61 aa3.47□□□□□ -1.85
TRP1YDR007W CUP1-2P0CX81 61 aa3.47□□□□□ -1.85
TRP1YDR007W YGR146C-AQ8TGT9 53 aa3.47□□□□□ -1.85
TRP1YDR007W TRA1P38811 3744 aa3.47□□□□□ -1.85
TRP1YDR007W TEL1P38110 2787 aa3.46□□□□□ -1.85
TRP1YDR007W YDR210WQ03482 75 aa3.46□□□□□ -1.86
TRP1YDR007W YLR255CO13574 117 aa3.45□□□□□ -1.86
TRP1YDR007W YEL014CP39999 101 aa3.43□□□□□ -1.86
TRP1YDR007W URA2P07259 2214 aaKnown RBP3.43□□□□□ -1.86
TRP1YDR007W YJR128WP47162 119 aa3.42□□□□□ -1.86
TRP1YDR007W YOR394C-AQ8TGJ0 55 aa3.4□□□□□ -1.87
TRP1YDR007W YHR073W-AP0C5N7 58 aa3.39□□□□□ -1.87
TRP1YDR007W OLI1P61829 76 aa3.39□□□□□ -1.87
TRP1YDR007W CMC4Q3E7A9 73 aa3.38□□□□□ -1.87
TRP1YDR007W RPL37BP51402 88 aaKnown RBP3.37□□□□□ -1.87
TRP1YDR007W YCL042WP25572 119 aa3.36□□□□□ -1.87
TRP1YDR007W YBR056W-AI2HB52 66 aa3.35□□□□□ -1.87
TRP1YDR007W YHR212W-AP0CX91 67 aa3.35□□□□□ -1.87
TRP1YDR007W COX7P10174 60 aa3.35□□□□□ -1.87
TRP1YDR007W YOR316C-AQ3E806 69 aa3.35□□□□□ -1.87
TRP1YDR007W PRP8P33334 2413 aaKnown RBP3.34□□□□□ -1.87
TRP1YDR007W YLL066W-BQ8TGJ7 56 aa3.34□□□□□ -1.87
TRP1YDR007W NUM1Q00402 2748 aa3.34□□□□□ -1.88
TRP1YDR007W RPL43AP0CX25 92 aaKnown RBP3.33□□□□□ -1.88
TRP1YDR007W RPL43BP0CX26 92 aa3.33□□□□□ -1.88
TRP1YDR007W Q0297Q9ZZV8 51 aa3.32□□□□□ -1.88
TRP1YDR007W MEC1P38111 2368 aa3.3□□□□□ -1.88
TRP1YDR007W YBL044WP38194 122 aa3.29□□□□□ -1.88
TRP1YDR007W YBR016WP38216 128 aa3.28□□□□□ -1.88
TRP1YDR007W YCR108CQ3E819 63 aa3.27□□□□□ -1.89
TRP1YDR007W LCL1Q02786 101 aa3.21□□□□□ -1.9
TRP1YDR007W YBR072C-AQ3E794 53 aa3.16□□□□□ -1.9
TRP1YDR007W YDR034C-AP0C289 58 aa3.14□□□□□ -1.91
TRP1YDR007W YJL009WP47078 108 aa3.12□□□□□ -1.91
TRP1YDR007W RPL37AP49166 88 aaKnown RBP3.07□□□□□ -1.92
TRP1YDR007W YOR072W-BQ3E832 53 aa3.07□□□□□ -1.92
TRP1YDR007W UTP20P35194 2493 aaKnown RBP3.06□□□□□ -1.92
TRP1YDR007W DYN1P36022 4092 aa3.06□□□□□ -1.92
TRP1YDR007W HHY1P39982 102 aa3.05□□□□□ -1.92
TRP1YDR007W YML054C-AQ3E809 52 aa2.86□□□□□ -1.95
TRP1YDR007W Q0017Q9ZZX8 53 aa2.74□□□□□ -1.97
TRP1YDR007W YOL164W-AQ3E7A5 60 aa2.64□□□□□ -1.99
TRP1YDR007W MDN1Q12019 4910 aaKnown RBP2.58□□□□□ -2
TRP1YDR007W YHR050W-AQ05451 56 aa2.42□□□□□ -2.02
TRP1YDR007W YLR157W-EP0CF00 54 aa2.32□□□□□ -2.04
TRP1YDR007W RPS29AP41057 56 aaKnown RBP2.3□□□□□ -2.04
TRP1YDR007W RPS29BP41058 56 aaKnown RBP2.09□□□□□ -2.07
Retrieved 63 of 5,963 RNA–protein pairs in 5.3 ms