RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CAMK1GQ96NX5 476 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 TMEM8AQ9HCN3 771 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 TRIM36Q9NQ86 728 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 ZBTB40Q9NUA8 1239 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 NOTCH4Q99466 2003 aa2.9□□□□□ -1.95
SMG1-212ENST00000566328 ALG1L2C9J202 215 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 NGFRP08138 427 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 TBXAS1P24557 533 aaPredicted RBP2.89□□□□□ -1.95
SMG1-212ENST00000566328 ALDH7A1P49419 539 aaKnown RBP2.89□□□□□ -1.95
SMG1-212ENST00000566328 YPEL5P62699 121 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 DGKKQ5KSL6 1271 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 C9orf50Q5SZB4 431 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 CAPRIN2Q6IMN6 1127 aaKnown RBP2.89□□□□□ -1.95
SMG1-212ENST00000566328 ZNF783Q6ZMS7 281 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 B4GALNT4Q76KP1 1039 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 SKAP1Q86WV1 359 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 FOXP4Q8IVH2 680 aaPredicted RBP2.89□□□□□ -1.95
SMG1-212ENST00000566328 B4GALNT2Q8NHY0 566 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 BCAS4Q8TDM0 211 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 CTHRC1Q96CG8 243 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 MVB12AQ96EY5 273 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 FAM84BQ96KN1 310 aaPredicted RBP2.89□□□□□ -1.95
SMG1-212ENST00000566328 NTPCRQ9BSD7 190 aaKnown RBP2.89□□□□□ -1.95
SMG1-212ENST00000566328 VN1R3Q9BXE9 311 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 SPC25Q9HBM1 224 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 DECR2Q9NUI1 292 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 LPAR3Q9UBY5 353 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 CPA4Q9UI42 421 aa2.89□□□□□ -1.95
SMG1-212ENST00000566328 A0A087WWL8 130 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 ACOT8O14734 319 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 INPPL1O15357 1258 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 CTIFO43310 598 aaKnown RBP2.88□□□□□ -1.95
SMG1-212ENST00000566328 KATNA1O75449 491 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 IL33O95760 270 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 CD19P15391 556 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 VCAM1P19320 739 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 CDK11BP21127 795 aaKnown RBP2.88□□□□□ -1.95
SMG1-212ENST00000566328 AKAP5P24588 427 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 TIRAPP58753 221 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 MFSD13AQ14CX5 517 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 PRTGQ2VWP7 1150 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 EARS2Q5JPH6 523 aaKnown RBP2.88□□□□□ -1.95
SMG1-212ENST00000566328 C12orf76Q8N812 135 aaPredicted RBP2.88□□□□□ -1.95
SMG1-212ENST00000566328 KBTBD7Q8WVZ9 684 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 JPH3Q8WXH2 748 aaPredicted RBP2.88□□□□□ -1.95
SMG1-212ENST00000566328 NR4A3Q92570 626 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 TRIM5Q9C035 493 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 MS4A7Q9GZW8 240 aaPredicted RBP2.88□□□□□ -1.95
SMG1-212ENST00000566328 TMEM45AQ9NWC5 275 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 STXBP5LQ9Y2K9 1186 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 PAXBP1Q9Y5B6 917 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 TNKSO95271 1327 aa2.88□□□□□ -1.95
SMG1-212ENST00000566328 AKAP10O43572 662 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 SPRY2O43597 315 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 RGS10O43665 173 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 ZC3H11AO75152 810 aaKnown RBP eCLIP2.87□□□□□ -1.95
SMG1-212ENST00000566328 ATF7P17544 494 aaPredicted RBP2.87□□□□□ -1.95
SMG1-212ENST00000566328 TNFRSF1BP20333 461 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 SLC14A1Q13336 389 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 RAB32Q13637 225 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 FHL3Q13643 280 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 FGL2Q14314 439 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 INSCQ1MX18 579 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 PTCHD3Q3KNS1 767 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 FAM57BQ71RH2 274 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 CATIPQ7Z7H3 387 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 MPP5Q8N3R9 675 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 OR6B3Q8NGW1 331 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 RAPGEF4Q8WZA2 1011 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 ATP2A3Q93084 1043 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 HSPBAP1Q96EW2 488 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 ZNF479Q96JC4 524 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 VPS50Q96JG6 964 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 MRGPRX1Q96LB2 322 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 MAP3K14Q99558 947 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 TUBB6Q9BUF5 446 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 ARMT1Q9H993 441 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 XPNPEP3Q9NQH7 507 aa2.87□□□□□ -1.95
SMG1-212ENST00000566328 NKX1-2Q9UD57 310 aaPredicted RBP2.87□□□□□ -1.95
SMG1-212ENST00000566328 TTBK1Q5TCY1 1321 aaPredicted RBP2.87□□□□□ -1.95
SMG1-212ENST00000566328 PRSS47A8MTI9 375 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 SPTLC2O15270 562 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 TBC1D4O60343 1298 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 UQCRC1P31930 480 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 SLC12A2P55011 1212 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 CTBP1Q13363 440 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 TMEM240Q5SV17 173 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 GFI1BQ5VTD9 330 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 RFX8Q6ZV50 586 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.86□□□□□ -1.95
SMG1-212ENST00000566328 IQCF1Q8N6M8 205 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 CELF5Q8N6W0 485 aaKnown RBP2.86□□□□□ -1.95
SMG1-212ENST00000566328 PNPLA1Q8N8W4 532 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 FAM71DQ8N9W8 422 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 DNAJB14Q8TBM8 379 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 DNASE2BQ8WZ79 361 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 C1GALT1C1Q96EU7 318 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 PPP1R9BQ96SB3 815 aa2.86□□□□□ -1.95
SMG1-212ENST00000566328 P2RX7Q99572 595 aaKnown RBP2.86□□□□□ -1.95
SMG1-212ENST00000566328 GTPBP4Q9BZE4 634 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms