RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 DARS2Q6PI48 645 aaKnown RBP5.92□□□□□ -1.46
LINC00254-201ENST00000563416 EXOC8Q8IYI6 725 aa5.92□□□□□ -1.46
LINC00254-201ENST00000563416 MPP5Q8N3R9 675 aa5.92□□□□□ -1.46
LINC00254-201ENST00000563416 NGDNQ8NEJ9 315 aaKnown RBP5.92□□□□□ -1.46
LINC00254-201ENST00000563416 TTC8Q8TAM2 541 aa5.92□□□□□ -1.46
LINC00254-201ENST00000563416 ANKS1AQ92625 1134 aa5.92□□□□□ -1.46
LINC00254-201ENST00000563416 C22orf23Q9BZE7 217 aa5.92□□□□□ -1.46
LINC00254-201ENST00000563416 DPH1Q9BZG8 443 aa5.92□□□□□ -1.46
LINC00254-201ENST00000563416 ATP6V0A4Q9HBG4 840 aa5.92□□□□□ -1.46
LINC00254-201ENST00000563416 NFAT5O94916 1531 aa5.92□□□□□ -1.46
LINC00254-201ENST00000563416 FRMPD2Q68DX3 1309 aaPredicted RBP5.92□□□□□ -1.46
LINC00254-201ENST00000563416 NINLQ9Y2I6 1382 aa5.92□□□□□ -1.46
LINC00254-201ENST00000563416 THSD7AQ9UPZ6 1657 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 PARP4Q9UKK3 1724 aaKnown RBP5.91□□□□□ -1.46
LINC00254-201ENST00000563416 BCL9LQ86UU0 1499 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 SBF2Q86WG5 1849 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 ISM1B1AKI9 464 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 MGEA5O60502 916 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 HRGP04196 525 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 RHOP08100 348 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 BRAFP15056 766 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 ZFXP17010 805 aaPredicted RBP5.91□□□□□ -1.46
LINC00254-201ENST00000563416 CLK3P49761 638 aaKnown RBP5.91□□□□□ -1.46
LINC00254-201ENST00000563416 KRT17Q04695 432 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 CTBP1Q13363 440 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 TBCCQ15814 346 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 AKNAD1Q5T1N1 836 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 ARHGAP40Q5TG30 622 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 RNF220Q5VTB9 566 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 CCSAPQ6IQ19 270 aaPredicted RBP5.91□□□□□ -1.46
LINC00254-201ENST00000563416 CHST15Q7LFX5 561 aaPredicted RBP5.91□□□□□ -1.46
LINC00254-201ENST00000563416 C14orf80Q86SX3 495 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 DTX2Q86UW9 622 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 PRIMA1Q86XR5 153 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 ADGRG3Q86Y34 549 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 LRTOMTQ8WZ04 291 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 UROC1Q96N76 676 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 ZNF518BQ9C0D4 1074 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 LRRC27Q9C0I9 530 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 OBP2AQ9NY56 170 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 DDX20Q9UHI6 824 aaKnown RBP5.91□□□□□ -1.46
LINC00254-201ENST00000563416 ENTPD2Q9Y5L3 495 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 USP19O94966 1318 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 ATRNO75882 1429 aa5.91□□□□□ -1.46
LINC00254-201ENST00000563416 MYO1FO00160 1098 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 GOLIM4O00461 696 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 TPP1O14773 563 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 TBX3O15119 743 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 PPM1DO15297 605 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 PEX14O75381 377 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 EIF3JO75822 258 aaKnown RBP5.9□□□□□ -1.46
LINC00254-201ENST00000563416 NR2F6P10588 404 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 SOX10P56693 466 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 EIF2B5Q13144 721 aaKnown RBP5.9□□□□□ -1.46
LINC00254-201ENST00000563416 POLD3Q15054 466 aaPredicted RBP5.9□□□□□ -1.46
LINC00254-201ENST00000563416 KIAA0753Q2KHM9 967 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 SWSAP1Q6NVH7 229 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 RD3Q7Z3Z2 195 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.9□□□□□ -1.46
LINC00254-201ENST00000563416 FAM156AQ8NDB6 213 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 SERTAD3Q9UJW9 196 aa5.9□□□□□ -1.46
LINC00254-201ENST00000563416 AFF2P51816 1311 aa5.9□□□□□ -1.47
LINC00254-201ENST00000563416 A0A1W2PP64 1363 aa5.9□□□□□ -1.47
LINC00254-201ENST00000563416 EDC4Q6P2E9 1401 aaKnown RBP5.9□□□□□ -1.47
LINC00254-201ENST00000563416 CAMTA1Q9Y6Y1 1673 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 LINC00473A8K010 186 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 VWC2LB2RUY7 222 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 MGST3O14880 152 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 SLC16A3O15427 465 aaKnown RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 ONECUT2O95948 504 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 ALDH9A1P49189 494 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 SUMO3P55854 103 aaPredicted RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 GRM3Q14832 879 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 MEX3CQ5U5Q3 659 aaKnown RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 ZNF772Q68DY9 489 aaPredicted RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 RGS7BPQ6MZT1 257 aaPredicted RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 FBXO42Q6P3S6 717 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 APOA5Q6Q788 366 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 ZNF551Q7Z340 670 aaPredicted RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 GAS2L3Q86XJ1 694 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 SLC15A3Q8IY34 581 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 BOLLQ8N9W6 283 aaKnown RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 RFKQ969G6 155 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 TIMP4Q99727 224 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 MESP1Q9BRJ9 268 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 MS4A7Q9GZW8 240 aaPredicted RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 GLOD4Q9HC38 313 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 ALG13Q9NP73 1137 aaKnown RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 A1CFQ9NQ94 594 aaKnown RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 SEMA4GQ9NTN9 838 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 OGDHLQ9ULD0 1010 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 NDRG4Q9ULP0 352 aaKnown RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 SH2B3Q9UQQ2 575 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 VIRMAQ69YN4 1812 aaKnown RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 TTC21AQ8NDW8 1320 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 CPDO75976 1380 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 KTN1Q86UP2 1357 aaKnown RBP5.89□□□□□ -1.47
LINC00254-201ENST00000563416 ANKRD36BQ8N2N9 1353 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 OVOS2A0A0J9YW53 1432 aa5.89□□□□□ -1.47
LINC00254-201ENST00000563416 OVOS2Q6IE36 1432 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms