RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 CNGB3Q9NQW8 809 aa11.33□□□□□ -0.6
NEDD8-205ENST00000527046 CDH7Q9ULB5 785 aa11.33□□□□□ -0.6
NEDD8-205ENST00000527046 USTQ9Y2C2 406 aa11.33□□□□□ -0.6
NEDD8-205ENST00000527046 MRPS23Q9Y3D9 190 aaKnown RBP11.33□□□□□ -0.6
NEDD8-205ENST00000527046 MYO16Q9Y6X6 1858 aa11.33□□□□□ -0.6
NEDD8-205ENST00000527046 C5orf42Q9H799 3197 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 SPDYE4A6NLX3 237 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 ANHXE9PGG2 379 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 ZNF197O14709 1029 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 GREM1O60565 184 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 TBX18O95935 607 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 TNFAIP3P21580 790 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 WEE1P30291 646 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 ZP2Q05996 745 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 EIF4EBP2Q13542 120 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-205ENST00000527046 GSE1Q14687 1217 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 PUS10Q3MIT2 529 aaKnown RBP11.32□□□□□ -0.6
NEDD8-205ENST00000527046 FAM78AQ5JUQ0 283 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 CYP4A22Q5TCH4 519 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 SYPL2Q5VXT5 272 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 ACAD10Q6JQN1 1059 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 OLFML1Q6UWY5 402 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 FAM183BPQ6ZVS7 135 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 PDZD4Q76G19 769 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-205ENST00000527046 MON1BQ7L1V2 547 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-205ENST00000527046 XYLT1Q86Y38 959 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 ELMOD1Q8N336 334 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 TMEM35BQ8NCS4 154 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 ZNF397Q8NF99 534 aaPredicted RBP11.32□□□□□ -0.6
NEDD8-205ENST00000527046 FBXO32Q969P5 355 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 MIS12Q9H081 205 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 ISCUQ9H1K1 167 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 FBXO44Q9H4M3 255 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 TASP1Q9H6P5 420 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 CCSER2Q9H7U1 834 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 LRRC4Q9HBW1 653 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.32□□□□□ -0.6
NEDD8-205ENST00000527046 EPS15L1Q9UBC2 864 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 ADAMTS1Q9UHI8 967 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 TMEM59LQ9UK28 342 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 NUDT5Q9UKK9 219 aa11.32□□□□□ -0.6
NEDD8-205ENST00000527046 BZW2Q9Y6E2 419 aaKnown RBP11.32□□□□□ -0.6
NEDD8-205ENST00000527046 SSU72P8A0A1W2PR75 194 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 SOBPA7XYQ1 873 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 COCHO43405 550 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 CCDC172P0C7W6 258 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 GZMAP12544 262 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 CDC25CP30307 473 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 ACADSBP45954 432 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 PPP3CCP48454 512 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 MRE11P49959 708 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 GSCP56915 257 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-205ENST00000527046 PITX1P78337 314 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-205ENST00000527046 GPR158Q5T848 1215 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 BSPRYQ5W0U4 402 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 TANGO2Q6ICL3 276 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 PARM1Q6UWI2 310 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 TRIM72Q6ZMU5 477 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 MMS22LQ6ZRQ5 1243 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 GET4Q7L5D6 327 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-205ENST00000527046 PHLDB2Q86SQ0 1253 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 ERICH1Q86X53 443 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 CNGA4Q8IV77 575 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 ARID3BQ8IVW6 561 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-205ENST00000527046 MCOLN2Q8IZK6 566 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 CMTM8Q8IZV2 173 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 ARL14EPQ8N8R7 260 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-205ENST00000527046 MAB21L3Q8N8X9 362 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 SPC24Q8NBT2 197 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 RSAD2Q8WXG1 361 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 IRGQQ8WZA9 623 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 FGF14Q92915 247 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 USP13Q92995 863 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-205ENST00000527046 ASB16Q96NS5 453 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 SMG9Q9H0W8 520 aaKnown RBP11.31□□□□□ -0.6
NEDD8-205ENST00000527046 TRPV4Q9HBA0 871 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 ST7Q9NRC1 585 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.31□□□□□ -0.6
NEDD8-205ENST00000527046 TRPM5Q9NZQ8 1165 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 CALCOCO1Q9P1Z2 691 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 UXTQ9UBK9 157 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-205ENST00000527046 CCL26Q9Y258 94 aa11.31□□□□□ -0.6
NEDD8-205ENST00000527046 NUP210Q8TEM1 1887 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-205ENST00000527046 MDM4O15151 490 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 GJB6O95452 261 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 PRAMEF12O95522 483 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 FGF19O95750 216 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 FTLP02792 175 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-205ENST00000527046 SP100P23497 879 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-205ENST00000527046 VIPR2P41587 438 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 SLC8A3P57103 927 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 YWHAGP61981 247 aaKnown RBP eCLIP11.3□□□□□ -0.6
NEDD8-205ENST00000527046 SLC7A9P82251 487 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 SLC6A3Q01959 620 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 GFPT1Q06210 699 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-205ENST00000527046 ZNF268Q14587 947 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-205ENST00000527046 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
NEDD8-205ENST00000527046 OTUD1Q5VV17 481 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-205ENST00000527046 BNIPLQ7Z465 357 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms