RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 NUBP1P53384 320 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 NAP1L1P55209 391 aaKnown RBP13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 C1QBPQ07021 282 aaKnown RBP13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 GPR17Q13304 367 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 MDH1BQ5I0G3 518 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 INTS6LQ5JSJ4 861 aaKnown RBP13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 ERICH1Q86X53 443 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 DCP1BQ8IZD4 617 aaKnown RBP13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 MCOLN2Q8IZK6 566 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 RNF10Q8N5U6 811 aaKnown RBP13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 ANKRD52Q8NB46 1076 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 C1orf131Q8NDD1 294 aaKnown RBP13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 UBA3Q8TBC4 463 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 MYCBPAPQ8TBZ2 947 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 ZNF653Q96CK0 615 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 HNRNPABQ99729 332 aaKnown RBP13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 MIS12Q9H081 205 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 SLC2A4RGQ9NR83 387 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 ADAM22Q9P0K1 906 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 TFR2Q9UP52 801 aa13.36□□□□□ -0.27
SSSCA1-203ENST00000526877 A0A0U1RQJ8 604 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 MOSPD3O75425 235 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 CPB1P15086 417 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 CCR2P41597 374 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 NOP2P46087 812 aaKnown RBP13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 BCAT1P54687 386 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 PTPN5P54829 565 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 BST2Q10589 180 aaKnown RBP13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 DNAAF5Q86Y56 855 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 RHOT2Q8IXI1 618 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 SIX5Q8N196 739 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 WDTC1Q8N5D0 677 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 SLC2A14Q8TDB8 520 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 GPR152Q8TDT2 470 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 IPO4Q8TEX9 1081 aaKnown RBP13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 ATRIPQ8WXE1 791 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 ING5Q8WYH8 240 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 SECISBP2LQ93073 1101 aaKnown RBP13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 TCEAL4Q96EI5 215 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 MCRS1Q96EZ8 462 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 CALR3Q96L12 384 aaKnown RBP13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 TMEM209Q96SK2 561 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 PHOX2BQ99453 314 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 RTP3Q9BQQ7 232 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 CORO1BQ9BR76 489 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 LRRC3Q9BY71 257 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 THAP2Q9H0W7 228 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 SYNCQ9H7C4 482 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 CRTAC1Q9NQ79 661 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 MYO1AQ9UBC5 1043 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 TRIM10Q9UDY6 481 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 GTF3C4Q9UKN8 822 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 FBXL21Q9UKT6 434 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 STRIP2Q9ULQ0 834 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 MRPS23Q9Y3D9 190 aaKnown RBP13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 NCANO14594 1321 aa13.35□□□□□ -0.27
SSSCA1-203ENST00000526877 MACROD2A1Z1Q3 448 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 MYBPHLA2RUH7 354 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 GALR2O43603 387 aaPredicted RBP13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 FAM200BP0CF97 657 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 AOC1P19801 751 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 MMP8P22894 467 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 GPD2P43304 727 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 EPHA5P54756 1037 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 TWF1Q12792 350 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 FAM171BQ6P995 826 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 C4orf50Q6ZRC1 276 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 MMS22LQ6ZRQ5 1243 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 MON1BQ7L1V2 547 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 HS6ST3Q8IZP7 471 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 FLCNQ8NFG4 579 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 OR10T2Q8NGX3 314 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 STK32AQ8WU08 396 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 RFFLQ8WZ73 363 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 PCED1BQ96HM7 432 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 C16orf45Q96MC5 204 aaPredicted RBP13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 PGLYRP2Q96PD5 576 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 C11orf70Q9BRQ4 267 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 DUSP16Q9BY84 665 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 B3GNT5Q9BYG0 378 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 MFSD1Q9H3U5 465 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 ST7Q9NRC1 585 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 GDE1Q9NZC3 331 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 CTTNBP2NLQ9P2B4 639 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 CNOT8Q9UFF9 292 aaKnown RBP13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 PAXBP1Q9Y5B6 917 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 DUSP10Q9Y6W6 482 aa13.34□□□□□ -0.27
SSSCA1-203ENST00000526877 FAM170AA1A519 330 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 MTMR11A4FU01 709 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 ABL1P00519 1130 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 CYP1A2P05177 515 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 TNNT1P13805 278 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 CEBPBP17676 345 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 GNG11P61952 73 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 ETF1P62495 437 aaKnown RBP13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 PDE4CQ08493 712 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 DUSP4Q13115 394 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 PDCLQ13371 301 aa13.33□□□□□ -0.28
SSSCA1-203ENST00000526877 TCEAL1Q15170 157 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms