RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 KCNA1Q09470 495 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 EGFLAMQ63HQ2 1017 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 GRAMD4Q6IC98 578 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 MIB1Q86YT6 1006 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 GLIS3Q8NEA6 775 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 CXorf38Q8TB03 319 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 MYCBPAPQ8TBZ2 947 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 SCFD1Q8WVM8 642 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 KBTBD7Q8WVZ9 684 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 ZNF419Q96HQ0 510 aaPredicted RBP20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 C8orf48Q96LL4 319 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 ZDHHC5Q9C0B5 715 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 NACA2Q9H009 215 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 MIR1-1HGQ9H1L0 117 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 SNX25Q9H3E2 840 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 PCIF1Q9H4Z3 704 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 SCUBE2Q9NQ36 999 aa20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 GOLGA4Q13439 2230 aaKnown RBP20.18■□□□□ 0.82
NCKIPSD-209ENST00000470006 TRIM24O15164 1050 aa20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 GCNT3O95395 438 aa20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 TNNC2P02585 160 aa20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 IRF1P10914 325 aa20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 TMEM25Q86YD3 366 aa20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 ETFBKMTQ8IXQ9 262 aa20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 FBXO32Q969P5 355 aa20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 ACOX2Q99424 681 aa20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 SLC6A17Q9H1V8 727 aa20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 SPHK2Q9NRA0 654 aa20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 DNAJC17Q9NVM6 304 aaKnown RBP20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 PCOLCE2Q9UKZ9 415 aa20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 RAD54BQ9Y620 910 aa20.17■□□□□ 0.82
NCKIPSD-209ENST00000470006 H3BQV1 296 aa20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 HOXC11O43248 304 aaPredicted RBP20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 EIF5BO60841 1220 aaKnown RBP20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 WARSP23381 471 aaKnown RBP20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 YWHAQP27348 245 aa20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 GNL1P36915 607 aaPredicted RBP20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 CYP4F3Q08477 520 aa20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 HECTD3Q5T447 861 aa20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 L1TD1Q5T7N2 865 aaKnown RBP20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 BBS7Q8IWZ6 715 aa20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 OR6B3Q8NGW1 331 aa20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 PRDM16Q9HAZ2 1276 aa20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 CD93Q9NPY3 652 aa20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 CHORDC1Q9UHD1 332 aaPredicted RBP20.16■□□□□ 0.82
NCKIPSD-209ENST00000470006 A0A1B0GTW7 788 aa20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 COCHO43405 550 aa20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 GARTP22102 1010 aa20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 C19orf57Q0VDD7 668 aa20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 GLRX5Q86SX6 157 aa20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 MARCH9Q86YJ5 346 aa20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 NUP93Q8N1F7 819 aa20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 ZCCHC9Q8N567 271 aaKnown RBP20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 PDZD8Q8NEN9 1154 aa20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 XPO6Q96QU8 1125 aaKnown RBP20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 GAREM1Q9H706 876 aa20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 KIAA1522Q9P206 1035 aaPredicted RBP20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 HCN2Q9UL51 889 aa20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 STARD13Q9Y3M8 1113 aa20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 SHROOM3Q8TF72 1996 aa20.15■□□□□ 0.82
NCKIPSD-209ENST00000470006 CBFA2T3O75081 653 aa20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 PPP1R37O75864 691 aa20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 PRPF6O94906 941 aaKnown RBP20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 CD6P30203 668 aa20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 LONP1P36776 959 aaKnown RBP20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 TMPRSS7Q7RTY8 843 aa20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 ADAM32Q8TC27 787 aa20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 RHBDD1Q8TEB9 315 aa20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 MRPL45Q9BRJ2 306 aaKnown RBP20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 CBWD1Q9BRT8 395 aa20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 ELOVL4Q9GZR5 314 aa20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 IL21RQ9HBE5 538 aa20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 INTS13Q9NVM9 706 aa20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 CACNA2D2Q9NY47 1150 aa20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 PCDHB13Q9Y5F0 798 aa20.14■□□□□ 0.81
NCKIPSD-209ENST00000470006 TRABD2BA6NFA1 517 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 NEDD8-MDP1E9PL57 170 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 RTN3O95197 1032 aaPredicted RBP20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 CER1O95813 267 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 PTPN1P18031 435 aaKnown RBP20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 MATKP42679 507 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 CACNA2D1P54289 1103 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 DUOXA2Q1HG44 320 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 CCDC157Q569K6 752 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 GPD1LQ8N335 351 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 OR5B17Q8NGF7 314 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 CRELD1Q96HD1 420 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 MRGPRX1Q96LB2 322 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 DCBLD2Q96PD2 775 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 GPR174Q9BXC1 333 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 ZNF518BQ9C0D4 1074 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 CCSER2Q9H7U1 834 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 TM7SF3Q9NS93 570 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 SEL1LQ9UBV2 794 aa20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 ASH1LQ9NR48 2969 aaKnown RBP20.13■□□□□ 0.81
NCKIPSD-209ENST00000470006 CLDN5O00501 218 aa20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 CILPO75339 1184 aa20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 PRB1P04280 392 aa20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 ATXN1LP0C7T5 689 aaKnown RBP20.12■□□□□ 0.81
NCKIPSD-209ENST00000470006 NCAM1P13591 858 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms