RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 NPR1P16066 1061 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 TACR3P29371 465 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 CPA2P48052 419 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 ARFIP2P53365 341 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 SLC13A2Q13183 592 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 ATAT1Q5SQI0 421 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 CACHD1Q5VU97 1274 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 ADHFE1Q8IWW8 467 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 RBMXL3Q8N7X1 1067 aaKnown RBP3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 NGDNQ8NEJ9 315 aaKnown RBP3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 CHMP4CQ96CF2 233 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 CTHRC1Q96CG8 243 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 ZBTB40Q9NUA8 1239 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 GAR1Q9NY12 217 aaKnown RBP3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 CDY1Q9Y6F8 540 aa3.97□□□□□ -1.77
HMGB1P31-201ENST00000437242 NOTCH4Q99466 2003 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 A0A088AWK7 358 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 A0A1W2PPL8 197 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 TMEM233B4DJY2 109 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 RGS10O43665 173 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 TBC1D4O60343 1298 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 RASAL1O95294 804 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 UQCRC1P31930 480 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 TIRAPP58753 221 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 CFHR3Q02985 330 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 SLC14A1Q13336 389 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 STIM1Q13586 685 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 MFSD13AQ14CX5 517 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 IFIT1BQ5T764 474 aaKnown RBP3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 DCAF12L1Q5VU92 463 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 DAAM2Q86T65 1068 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 KRT78Q8N1N4 520 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 PELI3Q8N2H9 469 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 HIC2Q96JB3 615 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 NLRP4Q96MN2 994 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 PPP1R9BQ96SB3 815 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 TRIM36Q9NQ86 728 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 PAXBP1Q9Y5B6 917 aa3.96□□□□□ -1.78
HMGB1P31-201ENST00000437242 IGLV5-39A0A0G2JS06 123 aa3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 CLIC1O00299 241 aa3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 CD3EAPO15446 510 aaKnown RBP3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 SYF2O95926 243 aaKnown RBP3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 PF4V1P10720 104 aa3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 ATF7P17544 494 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 HTR1BP28222 390 aa3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 RHDQ02161 417 aa3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 PFKFB3Q16875 520 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 INSCQ1MX18 579 aa3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 UBE2Q1Q7Z7E8 422 aa3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 DENND1CQ8IV53 801 aa3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 WDYHV1Q96HA8 205 aa3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 DPH1Q9BZG8 443 aa3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 TRIM5Q9C035 493 aa3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 MRPL44Q9H9J2 332 aaKnown RBP3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 MLXIPQ9HAP2 919 aa3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P31-201ENST00000437242 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 EME2A4GXA9 379 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 EXOC5O00471 708 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 INPPL1O15357 1258 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 AP1G1O43747 822 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 CD63P08962 238 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 KITP10721 976 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 NCLP19338 710 aaKnown RBP3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 TIAL1Q01085 375 aaKnown RBP eCLIP3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 ZNF267Q14586 743 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 ZNF585BQ52M93 769 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 Q6ZTC4 211 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 C18orf65Q6ZTR6 163 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 DIS3LQ8TF46 1054 aaKnown RBP3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 CAMK1GQ96NX5 476 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 ZPBPQ9BS86 351 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 ZNF518BQ9C0D4 1074 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 TCF7L1Q9HCS4 588 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 SEMA4BQ9NPR2 832 aaPredicted RBP3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 IP6K2Q9UHH9 426 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 ICKQ9UPZ9 632 aa3.94□□□□□ -1.78
HMGB1P31-201ENST00000437242 SBNO2Q9Y2G9 1366 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 CT47B1P0C2W7 299 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 TNFRSF1BP20333 461 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 CDC25AP30304 524 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 MCM5P33992 734 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 B4GALNT1Q00973 533 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 HYAL1Q12794 435 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 MANEAQ5SRI9 462 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 C12orf76Q8N812 135 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 IGFBPL1Q8WX77 278 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 SPSB4Q96A44 273 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 SLC25A28Q96A46 364 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 EDC3Q96F86 508 aaKnown RBP3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 ZBTB45Q96K62 511 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 NT5C1BQ96P26 610 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 SCNM1Q9BWG6 230 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 SLC12A5Q9H2X9 1139 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 SLCO5A1Q9H2Y9 848 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 ZMAT3Q9HA38 289 aaKnown RBP3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 SMURF2Q9HAU4 748 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 USP29Q9HBJ7 922 aa3.93□□□□□ -1.78
HMGB1P31-201ENST00000437242 A1CFQ9NQ94 594 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms